Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq16 100 2e-16 >seq16 Length=1330692 Score = 100 bits (110), Expect = 2e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 3917 GGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATT 3976 || ||||||||||| ||||| | ||||| ||| || | ||||| || || | | | Sbjct 824039 GGCCAAGAAAATATTCAAGAGCTCTTATCCAAACAGTTATATTTATGCCAGTTCCTTGTA 824098 Query 3977 GCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACA 4036 || || ||| |||| | ||| |||| |||| ||| |||| || |||||| | Sbjct 824099 GCTTTATCGATAGTACGTGAAGATGGACATTTTGTTTGTAAACTTTTTGACATATTTTCT 824158 Query 4037 CCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTC 4096 || || |||||||| | | ||||| ||| || |||||| || | || |||||||| Sbjct 824159 CCATTCAGTGCTGGACTTATATATTTAATGCATCATTCTTTTGATAGAATATGTATTTTT 824218 Query 4097 AAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATT 4136 |||||| |||| || || || |||||||| || |||| Sbjct 824219 AAACCAAATTCTAGTCGGCCTGCTAATTCTGAGAGGTATT 824258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276495553300666