Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq2954 123 1e-23 seq2213 122 5e-23 seq327 122 5e-23 seq66 122 5e-23 seq989 120 2e-22 seq14939 118 6e-22 seq1200 116 2e-21 seq1207 114 7e-21 seq2378 113 2e-20 seq1869 113 2e-20 seq2829 111 8e-20 >seq2954 Length=71535 Score = 123 bits (136), Expect = 1e-23 Identities = 81/89 (91%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 68767 AAAAAAAAAACAA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 68709 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 68708 GACGCTCTAACCAACTGAGCTAATGGGCC 68680 >seq2213 Length=145037 Score = 122 bits (134), Expect = 5e-23 Identities = 81/91 (89%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | || ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 22668 AAAAAAAAAACTAAGTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 22727 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||| |||||||||||||||||||||| Sbjct 22728 GACGCTCTAACCAACTGAGCTAATGGGCCGT 22758 >seq327 Length=672992 Score = 122 bits (134), Expect = 5e-23 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 672121 AAAAAAAAAAAAATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 672062 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 672061 GACGCTCTAACCAACTGAGCTAATGGGCC 672033 >seq66 Length=957529 Score = 122 bits (134), Expect = 5e-23 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| | ||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 737326 AAAAAAAAATACATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 737267 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 737266 GACGCTCTAACCAACTGAGCTAATGGGCC 737238 >seq989 Length=353122 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||| |||| |||||||||| |||||||||| |||||||||||||||||||||| Sbjct 204678 AAAAAAAAAAATAATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 204619 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||||||||||| Sbjct 204618 ACGCTCTAACCAACTGAGCTAATGGGCCG 204590 >seq14939 Length=1978 Score = 118 bits (130), Expect = 6e-22 Identities = 79/89 (89%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||||||||| ||| |||||| ||||||||||||||||||||| Sbjct 204 AAAAAAAAAAAAATTTGGCCCATGAGGGGAGCGAACCCGCGACCTTCGCGTTATTAGCAC 263 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 264 GACGCTCTAACCAACTGAGCTAATGGGCC 292 >seq1200 Length=256916 Score = 116 bits (128), Expect = 2e-21 Identities = 81/92 (88%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| | |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 174586 AAAAAAAAAT--ATTTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 174529 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||| |||||||||||||||||||| || Sbjct 174528 GACGCTCTAACCAACTGAGCTAATGGGCCATC 174497 >seq1207 Length=218036 Score = 114 bits (126), Expect = 7e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 49655 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 49714 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 49715 CTGAGCTAATGGGCC 49729 >seq2378 Length=122201 Score = 113 bits (124), Expect = 2e-20 Identities = 76/86 (88%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 12636 AAAAAAAAGAAGTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 12695 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 12696 GCTCTAACCAACTGAGCTAATGGGCC 12721 >seq1869 Length=149374 Score = 113 bits (124), Expect = 2e-20 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 133276 AAAAAAAAAAAGAAGTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 133217 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 133216 GACGCTCTAACCAACTGAGCTAATGGGCC 133188 >seq2829 Length=78852 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 58730 TGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 58789 Query 11516 TGAGCTAATGGGCCG 11530 ||||||||||||||| Sbjct 58790 TGAGCTAATGGGCCG 58804 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261436314794872