Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1130 84.2 4e-11 >seq1130 Length=290081 Score = 84.2 bits (92), Expect = 4e-11 Identities = 118/164 (72%), Gaps = 4/164 (2%) Strand=Plus/Minus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| || || || ||||| ||| ||||||||||| |||||||||||||| | || || Sbjct 65609 TGGAATCCTATTTAATCATGAAAGCCCAAGAAGAGGAGAGACATTTGTAACAAGAAAAAT 65550 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTT--ATCTTGGTAAT 194063 ||| | || || ||||||| | | ||| || | |||| ||| | || || || Sbjct 65549 AACAAGAAGTGTAGCTAAGATTCATTTAGGAGTATTG--GATTATTTTGAACTAGGAAAC 65492 Query 194064 CTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGA 194107 | || | ||| ||||||||||| ||||| ||||||||||| Sbjct 65491 TTGGATTCCTTGAGAGATTGGGGACATGCAAAAGATTATGTTGA 65448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807381353554320