Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq4446 96.9 4e-15 >seq4446 Length=45416 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 21115 AAAAATATTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACAT 21174 ||||| | ||||||||||||||||||| || | |||||| | ||| | ||| |||||| Sbjct 20955 AAAAAAACTTATTTAAAAATCAGCATCCAAAGTAAAAACACTTTCTGCCTTTGATGACAT 20896 Query 21175 AATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAA 21234 | || ||| || || |||| ||| |||| || || ||||| || || ||||| | Sbjct 20895 CACGCCAGCTTTCTGGTATTCACCCACTTTTTTCTCAAAGAAATTAGTTTTGCCTTCAAG 20836 Query 21235 TGATATAGATTCCATAAAATCAAATGGATTT 21265 ||| ||| ||||| || |||||||| ||| Sbjct 20835 TGAAATATGCTCCATGAAGTCAAATGGGTTT 20805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531786295055280