Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq501 129 7e-25 seq871 127 2e-24 seq2484 125 8e-24 seq5 118 1e-21 seq4446 102 9e-17 >seq501 Length=413276 Score = 129 bits (142), Expect = 7e-25 Identities = 81/86 (94%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAG 126321 |||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| Sbjct 272969 ACAGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAG 273028 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||||| Sbjct 273029 CGTGGGTTCGAACCCCACACCTGACA 273054 >seq871 Length=360440 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 54197 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 54138 Query 126324 TGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||||||||||| || Sbjct 54137 TGGGTTCGAACCCCACACCTGACACAT 54111 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/60 (93%), Gaps = 1/60 (2%) Strand=Plus/Minus Query 126289 GGCGCCAGATTTAAGATCTGGTTCCCTC-GGGAGCGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct 54844 GGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCGTGGGTTCGAACCCCACACCTGACA 54785 >seq2484 Length=135481 Score = 125 bits (138), Expect = 8e-24 Identities = 79/84 (94%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGGGAGCG 126323 |||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 3187 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGGGAGCG 3128 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 3127 TGGGTTCGAACCCCACACCTGACA 3104 >seq5 Length=1688606 Score = 118 bits (130), Expect = 1e-21 Identities = 82/91 (90%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 126260 TTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TCGG 126318 || || |||||||| ||||||||||||||||||||||||||||| |||||||||| || Sbjct 222984 TTAACCGTCAGGTTCGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATGG 222925 Query 126319 GAGCGTGGGTTCGAACCCCACA--CCTGACA 126347 |||||||||||||||||||||| ||||||| Sbjct 222924 GAGCGTGGGTTCGAACCCCACACCCCTGACA 222894 >seq4446 Length=45416 Score = 102 bits (112), Expect = 9e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||| | ||| |||||||| | |||||||| || ||||| |||||||||||||| | | Sbjct 5405 TTTGATAAATCAACTTCTTCTGCTGTCCAAAATGAAGCTTCGGCTTTTTTGTACATCTTC 5346 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700 || || || ||||||| ||| |||||||| ||||| | | |||||||| ||| || Sbjct 5345 CAAATATCATGATATTCAATGGGAAATATAACAAATCTTCTTGGGTTATCACGTAGCAAG 5286 Query 93701 GGCTCT 93706 || ||| Sbjct 5285 GGTTCT 5280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556740921791280