Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2150 95.1 2e-14 seq2954 93.3 9e-14 seq2802 91.5 3e-13 seq1323 91.5 3e-13 seq837 91.5 3e-13 seq744 91.5 3e-13 seq220 91.5 3e-13 seq146 91.5 3e-13 seq1111 89.7 1e-12 seq363 89.7 1e-12 seq166 89.7 1e-12 seq2163 86.0 1e-11 seq543 86.0 1e-11 seq3389 84.2 4e-11 seq296 84.2 4e-11 seq69 84.2 4e-11 >seq2150 Length=193232 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 78217 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 78276 Query 142563 CCCCACATCGGGCAGAA 142579 |||||| | |||| ||| Sbjct 78277 CCCCACGTTGGGCGGAA 78293 >seq2954 Length=71535 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 66392 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 66333 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 66332 GCCCCACGTTGGGC 66319 >seq2802 Length=84144 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 49339 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 49280 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 49279 CCCCACGTTGGGC 49267 >seq1323 Length=302028 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 26251 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 26310 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 26311 CCCCACGTTGGGC 26323 >seq837 Length=423465 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 272352 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 272411 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 272412 CCCCACGTTGGGC 272424 >seq744 Length=407796 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 261314 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 261373 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 261374 CCCCACGTTGGGC 261386 >seq220 Length=670580 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 142049 GCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTC 142108 ||||||| || ||||||| |||| ||||||||||||||||||||||||||| | |||||| Sbjct 232201 GCATGTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTC 232260 Query 142109 GACCCCCGCCAGAGACGC 142126 || |||| | || || || Sbjct 232261 GATCCCCACAAGGGATGC 232278 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 |||||| || ||||||| |||| ||||||||||||||||||||||||||| | ||||||| Sbjct 235105 CATGTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 235164 Query 142110 ACCCCCGCCAGAGACGC 142126 | |||| | || || || Sbjct 235165 ATCCCCACAAGGGATGC 235181 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109 || ||| || ||||||| |||| ||||||||||||||||||||||||||| | ||||||| Sbjct 236547 CAGGTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 236488 Query 142110 ACCCCCGCCAGAGACGC 142126 | |||| | || || || Sbjct 236487 ATCCCCACAAGGGATGC 236471 >seq146 Length=865701 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 155029 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 154970 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 154969 CCCCACGTTGGGC 154957 >seq1111 Length=270082 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 82799 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 82740 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 82739 CCCACGTTGGGC 82728 >seq363 Length=536511 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 59139 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 59080 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 59079 CCCACGTTGGGC 59068 >seq166 Length=818325 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 565498 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 565557 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 565558 CCCACGTTGGGC 565569 >seq2163 Length=176317 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| || ||||||| |||| ||||||||||||||||||||||||||| | |||||||| Sbjct 82028 TGTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGAT 82087 Query 142112 CCCCGCCAGAGA 142123 |||| | || || Sbjct 82088 CCCCACAAGGGA 82099 >seq543 Length=429152 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| || ||||||| |||| ||||||||||||||||||||||||||| | |||||||| Sbjct 412566 TGTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGAT 412507 Query 142112 CCCCGCCAGAGA 142123 |||| | || || Sbjct 412506 CCCCACAAGGGA 412495 >seq3389 Length=88999 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| || ||||||| |||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 47792 GTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 47851 Query 142113 CCCGCCAGAGA 142123 ||| | || || Sbjct 47852 CCCACAAGGGA 47862 >seq296 Length=504774 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| ||||||||||||| |||| ||||||||||||| |||||||| ||||| Sbjct 349552 TAGCCCGGCTAGCTCAGTCGGTTGAGCATGAGACTCTTAATCTCAGGGTCGTGGATTCGA 349493 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 349492 GCCCCACGTTGGGC 349479 >seq69 Length=959835 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| || ||||||| |||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 430454 GTCCCTTTGGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 430395 Query 142113 CCCGCCAGAGA 142123 ||| | || || Sbjct 430394 CCCACAAGGGA 430384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027610000743702