Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1996 120 8e-24 seq399 77.0 8e-11 >seq1996 Length=159150 Score = 120 bits (132), Expect = 8e-24 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||||||| |||||||| || | | | || ||| || || |||||||||||||| | Sbjct 78549 ACCCCATGTCTCGAGTCTTCCCGAAAGTAACGAAATGCACCTTCCACAAATACGGTCCCT 78608 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 ||||||| || | || | ||| ||||| ||| ||||||| |||| | |||||||||| Sbjct 78609 CGGGCTCAGTGCAGAAGTTCGACGGACTGTGCGTCCTCCCCCTGAACATCGTCAACGAGA 78668 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||||| | ||||| |||||||||||| Sbjct 78669 AGATCTATGTGTTCCTGTGGTTCTGGTTC 78697 >seq399 Length=588486 Score = 77.0 bits (84), Expect = 8e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 3419 TCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478 ||||||||||||| ||||| |||||||||||||| ||| | |||||||||||||||| Sbjct 402430 TCTGCATCCTCCCACTCAACGTTGTCAACGAGAAGATATACGTCTTCCTCTGGTTCTGGT 402489 Query 3479 TC 3480 || Sbjct 402490 TC 402491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477649197000