Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq684 150 4e-31 seq6499 141 2e-28 seq1688 95.1 3e-14 >seq684 Length=498857 Score = 150 bits (166), Expect = 4e-31 Identities = 172/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| ||| || ||||| | || ||||| |||||||||||||| | Sbjct 348736 CCACCTCTGAGTCGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAA 348677 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| ||||| || || || ||||||| | |||||| |||||| Sbjct 348676 AGAGTACGGCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGG---TCTGGG 348620 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||||||||| |||||||| || || ||||| || | ||| || || Sbjct 348619 GGGATTCCTTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGACGGCTCA 348560 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || || |||||||| || || |||||||| Sbjct 348559 ACTTCCAAGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 348510 Score = 143 bits (158), Expect = 6e-29 Identities = 156/206 (76%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| ||||||||| ||||||||||| | | || || || |||||||||||| Sbjct 348940 TGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGTTCGGCCATCTTCTAATTGT 348881 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATT 288387 || ||||| ||||| || | ||| ||| ||||| || |||||||||||||| ||| Sbjct 348880 TTACCTGCAAAGATTAGCCTCTGCTGA---TCTGGAGGAATACCTTCTTTATCCTGAATT 348824 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || |||||||| ||||| |||| ||| | || ||||| | ||||| ||||| || Sbjct 348823 TTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTGATGGTCTTTCCT 348764 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || || |||||||| Sbjct 348763 GTTAGAGTTTTCACAAAAATCTGCAT 348738 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || | ||| ||||| || || || | || |||||| |||||||| ||||| | Sbjct 350104 CCGCCTCTGAGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCTGAA 350045 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| ||||| ||||| || || || ||||||| | |||||| |||||| Sbjct 350044 AGAGTACGTCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGG---TCTGGG 349988 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||||||||| |||||||| || || ||||| || | ||| | || Sbjct 349987 GGGATACCTTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGATGGCTCA 349928 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||||| ||||| || || |||||||| ||||| |||||||| Sbjct 349927 ACTTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 349878 Score = 125 bits (138), Expect = 2e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | ||| || ||||||| ||| |||||| || || || || || | Sbjct 349193 TCCTCCACGGAGCCGAAGAACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGA 349134 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | ||| ||||| | |||||||| || || |||| | ||||||| ||| Sbjct 349133 GAGAGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGG 349074 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||||||| || ||||| || || || || ||||| |||| || | ||| || Sbjct 349073 GATTCCTTCTTTGTCTTGGATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAAC 349014 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| | || || || || || || ||||| || || || ||||||||| Sbjct 349013 TTCTAATGTAATAGTTTTGCCAGTAAGAGTTTTCACAAAAATCTGCATT 348965 Score = 118 bits (130), Expect = 3e-21 Identities = 160/222 (72%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||||||| || ||||||| || ||||||||||||||||||||| | | ||| || Sbjct 348499 AGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGACAACGTTCGG 348440 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG---GATTCCT 288372 || ||||| | || ||||| || || |||| | ||||| ||||| ||||||| Sbjct 348439 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGG---TCTGGAGGGATTCCT 348383 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||| |||||||| || || || || || || || | ||| | || ||||| | Sbjct 348382 TCTTTGTCCTGGATCTTAGCCTTAACATTCTCAATGGTATCAGAGGGCTCCACTTCCAAG 348323 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| || || | || || || || ||||||||| Sbjct 348322 GTGATGGTCTTGCCAGTTAATGTTTTCACAAAGATCTGCATT 348281 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| || |||||||| | |||||| || || ||||| | || || || || ||| Sbjct 350296 TCTTTTTGAATGTTATAGTCAGAGAGCGTACGGCCATCTTCAAGCTGCTTACCAGCAAAG 350237 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| ||| ||||||||||| || || || || ||||| || ||| Sbjct 350236 ATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCTTGAATCTTGGCTTTTACATTT 350177 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | || ||||| | ||||| ||||| || || |||||||| || Sbjct 350176 TCGATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTAACA 350117 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 350116 AAGATCTGCAT 350106 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| ||||| | ||| || ||||| || || ||||| | ||| || | ||| || Sbjct 349634 AAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATC 349575 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | ||||| ||||| ||||| || | ||| ||| ||| |||||||||||||| Sbjct 349574 CTCAAGCTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGTGGAATTCCTTCTTTATC 349515 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| ||||| || || || ||||| || | ||| | || || || | || || || Sbjct 349514 CTGAATTTTAGCCTTGACATTTTCAATCGTATCTGATGGCTCAACCTCCAAGGTAATGGT 349455 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || ||||| || || || |||||||| Sbjct 349454 CTTGCCTGTGAGAGTTTTAACAAAGATCTGCAT 349422 Score = 93.3 bits (102), Expect = 1e-13 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 ||||| || ||||| | || ||| ||||| ||||||||||| | | || || || Sbjct 349408 CTAAGGACAAGATGCAGAGTAGATTCCTTTTGAATATTATAGTCAGATAATGTACGACCA 349349 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 || || || || || || || || || | || || ||| | || || ||||| || Sbjct 349348 TCCTCCAACTGCTTGCCAGCAAAAATTAATCGTTGCTGATCAGGGGGAATCCCTTCCTTG 349289 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 || |||||||| || || || ||||| |||| || | ||| || || || || || Sbjct 349288 TCTTGGATTTTAGCCTTAACATTTTCAATAGTGTCAGAGGGTTCCACCTCAAGAGTAATA 349229 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || |||||||| || || || |||||| Sbjct 349228 GTCTTGCCAGTAAGAGTCTTAACAAAAATTTGCATT 349193 >seq6499 Length=11414 Score = 141 bits (156), Expect = 2e-28 Identities = 163/218 (75%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 ||||| || || |||| || |||||| || || |||||||| | ||| || || ||| Sbjct 685 CTAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAGAGAGAGTACGGCCG 744 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCT 288375 |||||||| || ||||| || |||||||| | ||| || |||| || || |||||| Sbjct 745 TCTTCTAACTGCTTTCCAGCAAAGATCAGCCTCTGCTG---ATCTGGAGGAATACCTTCT 801 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||| || || |||||||| ||||| || | ||| | || ||||| | ||| Sbjct 802 TTATCCTGAATCTTTGCTTTCACATTTTCAATCGTATCAGATGGCTCGACTTCTAAGGTG 861 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| ||||| || |||||||| Sbjct 862 ATGGTCTTTCCTGTGAGAGTTTTGACAAAGATCTGCAT 899 Score = 138 bits (152), Expect = 3e-27 Identities = 173/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | ||| || ||||| | || ||||| ||||||||||||| Sbjct 897 CATG-CCACCTCTGAGGCGAAGGACTAGATGGAGAGTAGACTCTTTCTGGATATTATAGT 955 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || || || || ||||| |||||||| || |||||||||| | |||||| || Sbjct 956 CTGAAAGAGTACGACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTG---AT 1012 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || |||||||| || |||||||| || || ||||| || ||||| || | ||| | Sbjct 1013 CTGGAGGGATTCCCTCCTTATCCTGTATCTTAGCTTTAACATTTTCAATGGTATCAGAGG 1072 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| | ||||| || || || || || ||||| || || |||||||| Sbjct 1073 GTTCCACTTCTAAAGTGATGGTTTTACCTGTGAGTGTCTTCACAAAAATCTGCAT 1127 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| ||||| | ||| || ||||| || || ||||| | ||| || | ||| || Sbjct 1143 AAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATC 1202 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | ||||| ||||| || |||| | ||||||| |||||||||||||||||| Sbjct 1203 CTCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTATC 1262 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||| ||||| || || || ||||| |||| ||| | || || || | || || || Sbjct 1263 CTGAATTTTAGCCTTGACATTTTCAATAGTATCTGATGGCTCAACCTCCAAGGTAATGGT 1322 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || |||||||| || || |||||||| Sbjct 1323 CTTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 1355 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 || ||| || ||||||| ||| || ||||| || || || || | ||| || | ||| Sbjct 456 TCGAAGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAGAGAGTTCTTCC 515 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||||| | || || || |||||||||| | ||| ||| ||| ||||||||||| Sbjct 516 ATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTT 575 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 || ||||| || || ||||| || || |||| ||| | |||||||| || ||||| Sbjct 576 GTCTTGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTACTTCCAGGGTGAT 635 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || || || || || ||||| Sbjct 636 AGTCTTGCCAGTAAGTGTTTTTACAAAGATTTGCAT 671 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| ||||| | ||| || ||||| || || ||||| | ||| || | ||| || Sbjct 3 AAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATC 62 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | ||||| ||||| || |||| | ||| ||| ||||||||||||||| || Sbjct 63 CTCAAGCTGTTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTC 122 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGT 288440 ||||| || || ||||| || || |||| || | |||||||| | || || || Sbjct 123 TTGGATCTTGGCCTTCACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGT 182 Query 288441 CTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || || || || || |||||||| Sbjct 183 CTTGCCAGTAAGTGTTTTTACAAAGATCTGCAT 215 >seq1688 Length=171348 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||| || ||||||||||| | || || | ||| ||||| |||||||| || || || | Sbjct 124680 CTTTCTGAATATTATAGTCAGATAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 124621 Query 288344 TCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTT 288403 | | | ||| || | || |||||||| |||||||| || || || || || |||| Sbjct 124620 TTAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTTT 124561 Query 288404 CTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 | || | || | ||||| || || || || ||||| || || || || ||||| | Sbjct 124560 CGATGGTGTCTGAAGGCTCTACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACAA 124501 Query 288464 ATATCTGCAT 288473 | |||||||| Sbjct 124500 AAATCTGCAT 124491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179394101146516