Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq757 107 2e-18 seq903 102 9e-17 seq216 102 9e-17 seq3 100 3e-16 seq501 96.9 4e-15 seq1293 95.1 1e-14 seq653 95.1 1e-14 seq6499 87.8 2e-12 >seq757 Length=353454 Score = 107 bits (118), Expect = 2e-18 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 84034 AAAAATTATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 83975 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | ||||||||||||||||||| || Sbjct 83974 TTACCACTATACTACCGAGGACTG 83951 Score = 107 bits (118), Expect = 2e-18 Identities = 74/84 (88%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 94375 AAAAATTATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 94316 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | ||||||||||||||||||| || Sbjct 94315 TTACCACTATACTACCGAGGACTG 94292 Score = 102 bits (112), Expect = 9e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 76421 AAAAAATATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 76362 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | ||||||||||||||||||| || Sbjct 76361 TTACCACTATACTACCGAGGACTG 76338 Score = 100 bits (110), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||||||| || ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 77481 AAAAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 77422 Query 57057 CTCACCACTATACTACCGAGGATTG 57081 || ||||||||||||||||||| || Sbjct 77421 CTTACCACTATACTACCGAGGACTG 77397 Score = 100 bits (110), Expect = 3e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 96705 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 96764 Query 57058 TCACCACTATACTACCGAGGATT 57080 | ||||||||||||||||||||| Sbjct 96765 TTACCACTATACTACCGAGGATT 96787 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| | | ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 87795 AAAAATATACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 87854 Query 57057 CTCACCACTATACTACCGAGGATTG 57081 || ||||||||||||||||||| || Sbjct 87855 CTTACCACTATACTACCGAGGACTG 87879 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2848 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 2789 Query 57067 TACTACCGAGGATTG 57081 |||||||||||| || Sbjct 2788 TACTACCGAGGACTG 2774 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 64024 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 63965 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 63964 TACTACCGAGGA 63953 >seq903 Length=307352 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 17365 AAAAATAGTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 17424 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 17425 TTACCACTATACTACCGAGGA 17445 >seq216 Length=799255 Score = 102 bits (112), Expect = 9e-17 Identities = 73/84 (87%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 52597 AAAAAATATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 52656 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | ||||||||||||||||||| || Sbjct 52657 TTACCACTATACTACCGAGGACTG 52680 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 53830 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 53771 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | ||||||||||||||||||| || Sbjct 53770 TTACCACTATACTACCGAGGACTG 53747 >seq3 Length=1978132 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1927602 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1927661 Query 57067 TACTACCGAGGATTG 57081 ||||||||||||||| Sbjct 1927662 TACTACCGAGGATTG 1927676 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1863271 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 1863330 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 1863331 TACTACCGAGGA 1863342 >seq501 Length=413276 Score = 96.9 bits (106), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 324577 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 324518 Query 57066 ATACTACCGAGGATTG 57081 ||||||||||||| || Sbjct 324517 ATACTACCGAGGACTG 324502 >seq1293 Length=289857 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 187935 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 187994 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 187995 TACTACCGAGGA 188006 >seq653 Length=484376 Score = 95.1 bits (104), Expect = 1e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 56992 TTTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGG 57051 |||| ||||| ||||| |||| | ||| |||||| ||||||||||||||||||||| Sbjct 239214 TTTAAAAAAAAAAATCTCCCCGGCGGGGAATAGAACCCCGGTCTCCCGCGTGACAGGCGG 239273 Query 57052 ACATACTCACCACTATACTACCGAGGATTG 57081 ||||| ||||||||||||||||||| || Sbjct 239274 GGATACTTACCACTATACTACCGAGGACTG 239303 >seq6499 Length=11414 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||||||| | | || | ||| | || |||||||||||||||||| || | Sbjct 216 ACCTCCTCTTAATCTAAGGACAAGATGGAGGGTTGACTCCTTTTGAATATTGTAGTCTGA 275 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || || ||||||||||||||||| || | | |||||| || | || Sbjct 276 GAGTGTACGTCCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGG 335 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||| ||| || || ||| | | | | ||||| || ||||| Sbjct 336 AATACCTTCCTTATCCTGTATCTTAGCTTTTACATTTTCGATTGTGTCAGACGGCTCCAC 395 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || || || || || |||||||||||||| Sbjct 396 TTCCAGGGTTATGGTCTTACCAGTGAGTGTTTTAACAAAGATTTGCAT 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543095859864480