Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq684 141 9e-29 seq6499 134 1e-26 >seq684 Length=498857 Score = 141 bits (156), Expect = 9e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | || |||||| || ||||||| || ||||||||||| || || || || | Sbjct 348509 ACCCCCTCTCAGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGA 348450 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | |||||||||||||| || ||| |||| | || || ||||| ||||| Sbjct 348449 CAACGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGG 348390 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||||| || || || || ||| ||| ||| | |||||| || ||||| Sbjct 348389 GATTCCTTCTTTGTCCTGGATCTTAGCCTTAACATTCTCAATGGTATCAGAGGGCTCCAC 348330 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||||||||| || || ||||| || || || |||||||| Sbjct 348329 TTCCAAGGTGATGGTCTTGCCAGTTAATGTTTTCACAAAGATCTGCATTTT 348279 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| | | ||||| || || || | || |||||||| || || ||||| || | Sbjct 349877 ACCGCCTCTGAGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCAGA 349818 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| | ||||| || ||| | || | || ||| ||||| || || Sbjct 349817 AAGAGTACGGCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGG 349758 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||| || ||||||| |||| ||||| ||| ||| | |||||| || |||| Sbjct 349757 AATTCCTTCCTTATCTTGTA-TTTTAGCTTTAACATTCTCGATGGTATCAGAGGGTTCCA 349699 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| ||| | ||| ||||| || | |||||| || ||||| ||||| Sbjct 349698 CTTCTAAAGTGATGGTTTTGCCAGTAAGAGTTTTCACAAAAATCTGCAT 349650 Score = 116 bits (128), Expect = 4e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||||| || |||||||| |||||||||||||| | || || | | || Sbjct 349178 AAGAACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATC 349119 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||| || || ||| | || | || ||| || || || || ||||||||||| || Sbjct 349118 TTCAAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTC 349059 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | || ||| | || ||||||| || | || Sbjct 349058 TTGGATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGT 348999 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || | |||||| || ||||| |||||| Sbjct 348998 TTTGCCAGTAAGAGTTTTCACAAAAATCTGCATT 348965 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || |||| ||| | || || |||||||||||||| || || | Sbjct 350333 ACCTCCACGAAGTCGCAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGA 350274 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || | |||||||||||||| || ||| | || | || |||||| || || || Sbjct 350273 GAGCGTACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGG 350214 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||||||| ||||| || || |||||| || | || ||| | || || Sbjct 350213 AATTCCTTCTTTGTCTTGAATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAAC 350154 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||| || | ||| || || || || ||||| Sbjct 350153 TTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCAT 350106 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| |||| || |||||||||||||| || || || | | ||| || | ||||| Sbjct 348946 ACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGTTCGGCCATCTTCT 348887 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | || || || ||| | || |||| |||||| || |||||||| |||||||| || || Sbjct 348886 AATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACCTTCTTTATCCTG- 348828 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | |||||||||| ||| || | |||||| | || ||||| | || | |||||| Sbjct 348827 AATTTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTGATGGTCTT 348768 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || | |||||| || ||||| ||||| Sbjct 348767 TCCTGTTAGAGTTTTCACAAAAATCTGCAT 348738 Score = 111 bits (122), Expect = 2e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 || ||||| || ||||| | || ||||| |||||||| || || || | | || || Sbjct 349411 AACCTAAGGACAAGATGCAGAGTAGATTCCTTTTGAATATTATAGTCAGATAATGTACGA 349352 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | || || | ||||||||| ||| |||| | || ||||| || || ||||| ||||| Sbjct 349351 CCATCCTCCAACTGCTTGCCAGCAAAAATTAATCGTTGCTGATCAGGGGGAATCCCTTCC 349292 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||| ||| || | || ||| || ||||| || | ||| Sbjct 349291 TTGTCTTGGATTTTAGCCTTAACATTTTCAATAGTGTCAGAGGGTTCCACCTCAAGAGTA 349232 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | |||||||| || | ||| || || |||||||||||| Sbjct 349231 ATAGTCTTGCCAGTAAGAGTCTTAACAAAAATTTGCATT 349193 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| | ||| || ||||| | || || || ||||| |||||||| |||| Sbjct 349649 ACCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGA 349590 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | | || |||||||| || || ||| | || |||| |||||| || || || Sbjct 349589 GAGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGTGG 349530 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||||||| || || ||||| ||| ||| || | ||||| | || || Sbjct 349529 AATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATCGTATCTGATGGCTCAAC 349470 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | |||||| || || || ||||| Sbjct 349469 CTCCAAGGTAATGGTCTTGCCTGTGAGAGTTTTAACAAAGATCTGCAT 349422 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 || ||| || ||||| | || || ||||| || || || || |||| | || || | Sbjct 348725 TCGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAAAGAGTACGGCC 348666 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| | ||||| || ||| | || | || ||| ||||| || || ||||||||||| Sbjct 348665 ATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCTTCTTT 348606 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCA-CCGGCGTCCACTTCTACAGTTA 64406 || || ||||| ||| ||| || | ||||||| |||| || ||||| | || | Sbjct 348605 ATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGACGGC-TCAACTTCCAAGGTGA 348547 Query 64407 CGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| || | ||| ||||| || || ||||| Sbjct 348546 TGGTCTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 348510 >seq6499 Length=11414 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | ||||| ||| || ||||||| ||| || || ||||||||||||||||| | | Sbjct 445 CCTCCTCTCAATCGAAGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAG 504 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || | | |||||||||||||| || || | || | || |||||| || || ||| Sbjct 505 AGAGTTCTTCCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGA 564 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| ||||| || || ||| ||| ||| | ||||| | || ||| Sbjct 565 ATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTACT 624 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | |||||||| || |||||||| Sbjct 625 TCCAGGGTGATAGTCTTGCCAGTAAGTGTTTTTACAAAGATTTGCAT 671 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 |||||||| || ||||| | || || || |||||||| ||||| |||| || || || Sbjct 226 AATCTAAGGACAAGATGGAGGGTTGACTCCTTTTGAATATTGTAGTCTGAGAGTGTACGT 285 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | |||||||||||||| || || | || | || |||||| || |||||||| ||||| Sbjct 286 CCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCC 345 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCA-CCGGCGTCCACTTCTACAGT 64404 || || ||||| || |||||| || | ||| ||| |||| |||||||| | || Sbjct 346 TTATCCTGTATCTTAGCTTTTACATTTTCGATTGTGTCAGACGGC-TCCACTTCCAGGGT 404 Query 64405 TACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||||| || || | ||||| || || |||||||| Sbjct 405 TATGGTCTTACCAGTGAGTGTTTTAACAAAGATTTGCAT 443 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || || || ||||| |||||||| |||| || || | | || Sbjct 3 AAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATC 62 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||| || || ||| |||| | || |||||| || || || ||||||||||| || Sbjct 63 CTCAAGCTGTTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTC 122 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| ||| | || ||| | || ||||| | || | || Sbjct 123 TTGGATCTTGGCCTTCACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGT 182 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | |||||||| || || ||||| Sbjct 183 CTTGCCAGTAAGTGTTTTTACAAAGATCTGCAT 215 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| | ||| || ||||| | || || || ||||| |||||||| |||| Sbjct 1128 ACCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGA 1187 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | | || |||||||| || || ||| |||| | || ||| || || || || Sbjct 1188 GAGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGG 1247 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||||| || || ||||| ||| ||| || | ||||| | || || Sbjct 1248 GATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATAGTATCTGATGGCTCAAC 1307 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | ||| || || || || ||||| Sbjct 1308 CTCCAAGGTAATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 1355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499537238965680