Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq684 127 1e-24 seq6499 122 6e-23 seq1688 100 2e-16 >seq684 Length=498857 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| || || ||||| || ||||||||||| |||| |||| | ||||| Sbjct 349175 AACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATCTTC 349116 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | ||||| ||||| ||||||| | |||||| || ||| |||||||| ||||| Sbjct 349115 AAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTG 349056 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || || ||| |||| ||||| || ||| || ||||| ||||| ||||| Sbjct 349055 GATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGTTTT 348996 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| |||||||| ||||| Sbjct 348995 GCCAGTAAGAGTTTTCACAAAAATCTGCAT 348966 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || ||||| ||||| || || ||||| || ||| | | | ||||| ||||| Sbjct 349852 TGGAGAGTAGATTCTTTCTGGATATTGTAGTCAGAAAGAGTACGGCCATCTTCCAATTGC 349793 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | ||||| | ||||||||| |||||||||||||| || ||||| Sbjct 349792 TTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCCTTATCTTGTATTTTA 349733 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || || ||||| ||| || ||||| || |||||||| || || Sbjct 349732 GCTTTAACATTCTCGATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTTTTGCCAGTA 349673 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 |||||||| |||||||| |||||| Sbjct 349672 AGAGTTTTCACAAAAATCTGCATA 349649 Score = 107 bits (118), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022 |||||||| ||||| || || |||||||| || || || || || || ||| | | Sbjct 348949 AAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCA--GACAAGGTTCGGCCAT 348892 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 ||||||||||||| || || | || | | ||| || || ||||| ||||| || | Sbjct 348891 CTTCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACCTTCTTTAT 348832 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | |||||| ||| ||| |||| |||||||| || || || ||||| |||| Sbjct 348831 CCTGAATTTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAAGGTGATGG 348772 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || ||||| |||||||| |||||||| |||||| Sbjct 348771 TCTTTCCTGTTAGAGTTTTCACAAAAATCTGCATA 348737 Score = 102 bits (112), Expect = 6e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||||||||| || || || |||||||| ||||| || || ||| | | | ||||| Sbjct 350315 AACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAGAGCGTACGGCCATCTTC 350256 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || ||||| | ||||| | ||| || || |||||||||||| ||||| Sbjct 350255 AAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCTTG 350196 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| ||| ||||||| |||| || || || || || || ||||| ||||| || Sbjct 350195 AATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTCTT 350136 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || ||||| || |||||| Sbjct 350135 GCCAGTAAGAGTCTTAACAAAGATCTGCATA 350105 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||| | | || | ||| || || || || |||||||||||||| || | Sbjct 349648 CCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAG 349589 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | || || | ||||| || || | || | | ||| || || |||| Sbjct 349588 AGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGTGGA 349529 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || |||||| || ||| |||| || ||||| || || Sbjct 349528 ATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATCGTATCTGATGGCTCAACC 349469 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||||||||| || ||||| |||||||| ||||| || |||||| Sbjct 349468 TCCAAGGTAATGGTCTTGCCTGTGAGAGTTTTAACAAAGATCTGCATA 349421 >seq6499 Length=11414 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| |||| ||||| | || | |||||| || || || ||||| ||||||||||| Sbjct 443 TGCCTCCTCTCAATCGAAGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAG 502 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 |||| |||| | ||||| | || || |||||| | ||||| | ||| || || || Sbjct 503 AGAGAGTTCTTCCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTG 562 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||||||||| ||||| || ||| || ||| | || |||||||| |||| Sbjct 563 GAATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTA 622 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | ||| || || || || || || ||||||||||| ||||||||| Sbjct 623 CTTCCAGGGTGATAGTCTTGCCAGTAAGTGTTTTTACAAAGATTTGCATA 672 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 |||| ||| || ||||| ||||| || || || || || ||| | | | ||||| Sbjct 919 ACTAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAAAGAGTACGACCATCTTCC 978 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| |||||| | ||||| | |||||| || || ||||| ||||| || Sbjct 979 AATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGT 1038 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || ||| ||| |||| || ||||| ||| || ||||| || ||||||||| Sbjct 1039 ATCTTAGCTTTAACATTTTCAATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTTTTA 1098 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || |||||||| |||||| Sbjct 1099 CCTGTGAGTGTCTTCACAAAAATCTGCATA 1128 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| ||| | | || | ||| || || || || |||||||||||||| || | Sbjct 1129 CCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAG 1188 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| | || || | ||||| || || | ||||| | |||||| || ||| Sbjct 1189 AGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGGG 1248 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || |||||| || ||| |||| |||||||| || || Sbjct 1249 ATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATAGTATCTGATGGCTCAACC 1308 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || ||||||||||| || ||||| ||||| || ||||| || |||||| Sbjct 1309 TCCAAGGTAATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCATA 1356 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || |||||||||||||| || |||| |||| | || || | || Sbjct 12 ATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCCTCAAGCTG 71 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| || || | ||||| | ||| || || ||| |||||||| ||||| || || Sbjct 72 TTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 131 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || ||||| || | ||||| || |||||||| || || || || Sbjct 132 GGCCTTCACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGTCTTGCCAGT 191 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || ||||||||||| || |||||| Sbjct 192 AAGTGTTTTTACAAAGATCTGCATA 216 >seq1688 Length=171348 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 14987 CTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15046 |||| || || || || || ||| |||| | ||||| |||||||| ||||| | | Sbjct 124680 CTTTCTGAATATTATAGTCAGATAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 124621 Query 15047 TCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTT 15106 | || | ||| ||||| |||||||||||||| || ||| || || ||| ||| Sbjct 124620 TTAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTTT 124561 Query 15107 CTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15166 | || || || | ||||| || | |||||| || ||||| || || ||||| |||| Sbjct 124560 CGATGGTGTCTGAAGGCTCTACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACAA 124501 Query 15167 AAATTTGCATATTTG 15181 |||| |||||||||| Sbjct 124500 AAATCTGCATATTTG 124486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357316985876270