Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq684 107 2e-18 seq6499 96.9 3e-15 >seq684 Length=498857 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | ||||| || ||||| | || |||||||||||||| || || || Sbjct 350332 CCTCCACGAAGTCGCAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAG 350273 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| || ||| || ||||| || ||||| ||||||| | ||||||||| || || Sbjct 350272 AGCGTACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGA 350213 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || || |||| | ||| | | || || | | ||||| |||||| | ||| || Sbjct 350212 ATTCCTTCTTTGT-CTTGAATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAAC 350154 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | || ||||| || ||||| || ||||| |||||||| Sbjct 350153 TTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCAT 350106 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | ||||| || || || | || || |||||||||||||| || || Sbjct 348965 TCCACCACGAAGGCGCAAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGA 348906 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || || ||| |||| ||||| || || |||| | | ||||||||| ||||| Sbjct 348905 CAAGGTTCGGCCATCTTCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGG 348846 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 || || || || ||| ||| ||| ||| || | | ||| | || || | ||| | Sbjct 348845 AATACCTTCTTTATCC-TGAATTTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAA 348787 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| | ||| | || || || || |||||||| |||||||||||||| Sbjct 348786 CTTCCAAGGTGATGGTCTTTCCTGTTAGAGTTTTCACAAAAATCTGCAT 348738 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| ||||| |||||||| | || | ||| || |||||||||||| Sbjct 349162 GTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATCTTCAAGCTGTTTTCCA 349103 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || | ||||| | ||| ||||| || || || || || ||||| ||| || |||| Sbjct 349102 GCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTTAGCCTTG 349043 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| | ||||| | || ||||| | || | |||||||| || |||||| Sbjct 349042 ACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGTTTTGCCAGTAAGAGTT 348983 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 348982 TTCACAAAAATCTGCAT 348966 >seq6499 Length=11414 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||||||||| || | || || ||| || ||||| || ||| Sbjct 247 GTTGACTCCTTTTGAATATTGTAGTCTGAGAGTGTACGTCCATCTTCAAGCTGCTTACCA 306 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | ||||||||| ||||| || || ||||| ||| || || || Sbjct 307 GCGAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGTATCTTAGCTTTT 366 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||||| ||||| | ||| ||||| | ||| | || || || || || ||| Sbjct 367 ACATTTTCGATTGTGTCAGACGGCTCCACTTCCAGGGTTATGGTCTTACCAGTGAGTGTT 426 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 427 TTAACAAAGATTTGCATGCCT 447 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 ||||| | |||| ||| | ||| ||||| |||||||| |||||||| | || | Sbjct 454 AATCGAAGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAGAGAGTTCTT 513 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || ||||| || |||||| ||||||| | ||||||||| || || || || || Sbjct 514 CCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCT 573 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| ||| || ||| | | || | || || | ||| ||||| | ||| Sbjct 574 TTGTCTTGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTACTTCCAGGGTG 633 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || ||||| || || ||||||||||| || ||||| Sbjct 634 ATAGTCTTGCCAGTAAGTGTTTTTACAAAGATTTGCAT 671 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||||||||| || ||||| || || | || ||| ||| || | ||||| ||| Sbjct 931 GTAGACTCTTTCTGGATATTATAGTCTGAAAGAGTACGACCATCTTCCAATTGTTTACCA 990 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||| ||| ||||| ||||| || |||||||| ||| || || || Sbjct 991 GCGAAGATCAATCTCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGTATCTTAGCTTTA 1050 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | ||| | ||| || | || ||||| | || | ||||| || || || || Sbjct 1051 ACATTTTCAATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTTTTACCTGTGAGTGTC 1110 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 1111 TTCACAAAAATCTGCAT 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475398436565280