Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6499 138 3e-27 seq684 138 3e-27 seq1688 120 7e-22 >seq6499 Length=11414 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || || ||||||||||| | |||||| |||| | ||| ||||||||| Sbjct 460 AGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAGAGAGTTCTTCCATCT 519 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | | |||||| || || |||||||||| || Sbjct 520 TCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCT 579 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | || |||| || ||||| |||| ||||| ||| Sbjct 580 TGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTACTTCCAGGGTGATAGTC 639 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||| ||||| Sbjct 640 TTGCCAGTAAGTGTTTTTACAAAGATTTG 668 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| |||||||| ||||| || ||||||||||| | |||||||| | | || | ||| Sbjct 228 TCTAAGGACAAGATGGAGGGTTGACTCCTTTTGAATATTGTAGTCTGAGAGTGTACGTCC 287 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| |||||||| || |||||||| | | |||||| || ||| ||| ||||| Sbjct 288 ATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTT 347 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| || || ||||| ||||| | | || || |||| || || Sbjct 348 ATCCTGTATCTTAGCTTTTACATTTTCGATTGTGTCAGACGGCTCCACTTCCAGGGTTAT 407 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| ||||| ||||| ||||| ||||| Sbjct 408 GGTCTTACCAGTGAGTGTTTTAACAAAGATTTG 440 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 || || |||||||| ||||| || || || || | ||| ||||||| | ||| | || Sbjct 685 CTAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAGAGAGAGTACGGCCG 744 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| | ||||||||| || ||||| || | |||||| || ||| ||| |||||| Sbjct 745 TCTTCTAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTA 804 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 |||||||||||| ||||| ||| | || || | || || || || || ||||| Sbjct 805 TCCTGAATCTTTGCTTTCACATTTTCAATCGTATCAGATGGCTCGACTTCTAAGGTGATG 864 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || ||||||||||| ||||| || || Sbjct 865 GTCTTTCCTGTGAGAGTTTTGACAAAGATCTG 896 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || ||||||||||| | ||||||||| | | ||| |||||||| Sbjct 1144 AGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCC 1203 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || || || || | | ||| || || || ||||||||| ||| Sbjct 1204 TCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTATCC 1263 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| || ||| | || |||| || || || ||||| || || ||| Sbjct 1264 TGAATTTTAGCCTTGACATTTTCAATAGTATCTGATGGCTCAACCTCCAAGGTAATGGTC 1323 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || ||||| || || Sbjct 1324 TTGCCTGTGAGAGTCTTAACAAAGATCTG 1352 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || ||||||||||| | ||||||||| | | ||| |||||||| Sbjct 4 AGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCC 63 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || || || || | | |||||| || || ||||||||| || Sbjct 64 TCAAGCTGTTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 123 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | ||||| | | ||||| ||||| || || ||| Sbjct 124 TGGATCTTGGCCTTCACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGTC 183 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || ||||| ||||| || || Sbjct 184 TTGCCAGTAAGTGTTTTTACAAAGATCTG 212 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| ||||| || |||| || ||||| | | ||| | |||||| Sbjct 916 AGGACTAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAAAGAGTACGACCATCT 975 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| || || || |||||||| | | ||| || || ||| ||||| || ||| Sbjct 976 TCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGAGGGATTCCCTCCTTATCC 1035 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || ||| | ||| || | | ||| || || || ||||| || Sbjct 1036 TGTATCTTAGCTTTAACATTTTCAATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTT 1095 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || Sbjct 1096 TTACCTGTGAGTGTCTTCACAAAAATCTG 1124 >seq684 Length=498857 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || ||||||||||| | ||||||||| | | ||| |||||||| Sbjct 349633 AGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCC 349574 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || || || ||||| || | |||||| || || |||||||||| ||| Sbjct 349573 TCAAGCTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGTGGAATTCCTTCTTTATCC 349514 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| || ||| | || |||| || || || ||||| || || ||| Sbjct 349513 TGAATTTTAGCCTTGACATTTTCAATCGTATCTGATGGCTCAACCTCCAAGGTAATGGTC 349454 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||||||||| ||||| || || Sbjct 349453 TTGCCTGTGAGAGTTTTAACAAAGATCTG 349425 Score = 127 bits (140), Expect = 5e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | || ||||||| ||| || Sbjct 348958 CGAAGGCGCAAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGTT 348899 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | || || || || ||||| || | |||||| || ||| ||| ||| Sbjct 348898 CGGCCATCTTCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACCT 348839 Query 199529 TCTCGCTCCTGAATCTTTTGCTT-CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| |||||||| |||||||| ||| ||| | || || | || || || ||||| Sbjct 348838 TCTTTATCCTGAAT-TTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAA 348780 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||||||||||||||| || Sbjct 348779 GGTGATGGTCTTTCCTGTTAGAGTTTTCACAAAAATCTG 348741 Score = 123 bits (136), Expect = 6e-23 Identities = 162/224 (72%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||| |||||||| || ||||| || || ||||||| || ||||||| ||| || | Sbjct 348499 AGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGACAACGTTCGG 348440 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||| ||||||||||| || || || | | || ||||| ||| ||||||||| Sbjct 348439 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGGATTCCTTCT 348380 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| || || | ||| || | | || || ||||| ||| Sbjct 348379 TTGTCCTGGATCTTAGCCTTAACATTCTCAATGGTATCAGAGGGCTCCACTTCCAAGGTG 348320 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || || | ||||||||||| || || |||||| Sbjct 348319 ATGGTCTTGCCAGTTAATGTTTTCACAAAGATCTG---CATTTT 348279 Score = 116 bits (128), Expect = 9e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || |||||||||||||| || || || |||| |||||||||| | ||| | Sbjct 349867 AGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCAGAAAGAGTACGG 349808 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| ||||| || || ||||| | | ||| ||||| || ||||||||| Sbjct 349807 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCC 349748 Query 199532 CGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 || || || ||| || || || |||| ||| || | | ||| || || || || Sbjct 349747 TTATCTTGTAT-TTTAGCTTTAACATTCTCGATGGTATCAGAGGGTTCCACTTCTAAAGT 349689 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || ||||||||||||||||| || Sbjct 349688 GATGGTTTTGCCAGTAAGAGTTTTCACAAAAATCTG 349653 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || ||||| || || || || | |||||| |||| | ||| ||||||||| Sbjct 349177 AGAACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATCT 349118 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| ||||| || || || | | ||| || || || ||||||||| || Sbjct 349117 TCAAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTCT 349058 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || ||| | ||||| | || ||| || || || || || || Sbjct 349057 TGGATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGTT 348998 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||||||||||||||| || Sbjct 348997 TTGCCAGTAAGAGTTTTCACAAAAATCTG 348969 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || |||||||||||||| || || || |||| |||||||| | | ||| | | Sbjct 350095 AGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTACGT 350036 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| ||||| || || ||||| | | ||| ||||| || || |||||| Sbjct 350035 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATACCTTCT 349976 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| || ||| || ||| | || || | || || || ||||| ||| Sbjct 349975 TTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGATGGCTCAACTTCCAAGGTG 349916 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || ||||| || || || || || Sbjct 349915 ATGGTCTTGCCAGTAAGAGTCTTAACGAAGATCTG 349881 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 || |||||||| || ||||| || |||||||| | || ||||||| || || | ||| Sbjct 349408 CTAAGGACAAGATGCAGAGTAGATTCCTTTTGAATATTATAGTCAGATAATGTACGACCA 349349 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || |||| |||||| || || || || | || ||||| || || ||| ||||| Sbjct 349348 TCCTCCAACTGCTTGCCAGCAAAAATTAATCGTTGCTGATCAGGGGGAATCCCTTCCTTG 349289 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || || || || ||| || ||| | ||||| | | ||| || || | || || Sbjct 349288 TCTTGGATTTTAGCCTTAACATTTTCAATAGTGTCAGAGGGTTCCACCTCAAGAGTAATA 349229 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| || ||||||||||| Sbjct 349228 GTCTTGCCAGTAAGAGTCTTAACAAAAATTTG 349197 >seq1688 Length=171348 Score = 120 bits (132), Expect = 7e-22 Identities = 141/190 (74%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 199451 TTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGC 199510 || ||||||| | ||| ||||||||||||| || || || || || || | | |||| Sbjct 124669 TTATAGTCAGATAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAATTAACCTCTGC 124610 Query 199511 TGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCT 199570 ||||| ||| ||||||||| ||||||||||| ||| || ||||| ||||||| Sbjct 124609 TGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATGGTGTCT 124550 Query 199571 GTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTAC 199630 | | ||||| || | || || |||||||||||||| ||||| |||||||| || | Sbjct 124549 GAAGGCTCTACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACAAAAATCTG---C 124493 Query 199631 ATTTTAGCCT 199640 || || |||| Sbjct 124492 ATATTTGCCT 124483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178661462843874