Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq295 102 4e-17 >seq295 Length=498498 Score = 102 bits (112), Expect = 4e-17 Identities = 106/134 (79%), Gaps = 4/134 (3%) Strand=Plus/Plus Query 25931 TCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCT 25990 |||||||| | ||| || ||||| | ||||||||| |||||||| |||| | ||||||| Sbjct 344240 TCCATAAAAAGATCAGGTATCCATAATGCATAAAACAAATCTCTTGCTCGAACTTCTTCT 344299 Query 25991 TTTCC-GTGATTCTTTTTTAGATCTAAGAAAT-CAAAAATATCTGAGTGCCATGGTTCTA 26048 || || ||| || || || | ||| ||||||| | || | ||||| ||||| ||||||| Sbjct 344300 TTCCCAGTGTTT-TTCTTCAAATC-AAGAAATTCTAACACATCTGCATGCCAGGGTTCTA 344357 Query 26049 AATAGATAGCAAAA 26062 |||||| |||||| Sbjct 344358 AATAGACGGCAAAA 344371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252986888643650