Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1485 100 3e-16 >seq1485 Length=220917 Score = 100 bits (110), Expect = 3e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| ||||||| | ||||||| |||||||| | ||| |||||||| || ||| Sbjct 31891 CCATGATAGACTGCATACATGGCAGACATGTTTGCGAGTAATGCCTGTGCTGTACATATG 31950 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGC 139381 || || || || |||||||| | ||||| ||||||||||| || ||||| Sbjct 31951 TTGCTAGTGGCCTTGTCTCTGCGGATATGTTGCTCTCTAGTCTGAAGTGC 32000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578873756119440