Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq684 136 6e-27 seq6499 125 1e-23 >seq684 Length=498857 Score = 136 bits (150), Expect = 6e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | ||||| | ||||| |||||||||||||||||||| ||| || Sbjct 348965 AATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACTATTACATTAGAAGTTGAACCATC 349024 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | |||| ||| || || ||| || ||||| |||||||| || || ||||| || Sbjct 349025 TGACACTATTGAAAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCA 349084 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 ||| || ||||| | ||| || || ||||| |||||| |||||| | || ||||| || Sbjct 349085 ACAGAGGTTGATATTTGCTGGAAAACAGCTTGAAGATGGAAGAACTCTCTCTGATTACAA 349144 Query 156002 TATATCCAAAGAGGCGACGCTTCAT 156026 || ||||| | || |||||| Sbjct 349145 CATTCAGAAAGAATCCACTCTTCAT 349169 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | ||||| ||||| || || |||||||| ||| ||| Sbjct 349650 ATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTAGAAGTGGAACCCTCT 349709 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| || || || ||| ||||||||||||||| ||||| || || ||||| ||| Sbjct 349710 GATACCATCGAGAATGTTAAAGCTAAAATACAAGATAAGGAAGGAATTCCCCCAGACCAA 349769 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||| |||||||| | |||||| | | ||| | || || || ||| Sbjct 349770 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCTGACTACAAT 349829 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || | || | || | ||||||||| Sbjct 349830 ATCCAGAAAGAATCTACTCTCCACCTTGTTCTTAGGCTCAGAGGCGGT 349877 Score = 116 bits (128), Expect = 5e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | || ||||| || || || || ||||| || ||| Sbjct 348738 ATGCAGATTTTTGTGAAAACTCTAACAGGAAAGACCATCACCTTGGAAGTTGAGCCATCT 348797 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| |||||| ||||| || ||||||||||| || |||||||| || Sbjct 348798 GATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 348857 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| ||||| || | |||||| | |||| || || || |||||| Sbjct 348858 CAGAGGCTAATCTTTGCAGGTAAACAATTAGAAGATGGCCGAACCTTGTCTGACTATAAT 348917 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTT 156034 || ||||| | || ||||| ||||| || Sbjct 348918 ATTCAAAAAGAATCCACTCTTCACTTAGTTTT 348949 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || | || || || || || || || ||||| || ||| Sbjct 348510 ATGCAGATCTTTGTAAAGACTCTCACAGGCAAGACCATCACCTTGGAAGTTGAGCCGTCT 348569 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || || ||||| || ||||||||||| || || ||||| ||| Sbjct 348570 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGAATCCCCCCAGACCAA 348629 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||| |||||||| | |||||| | | ||| | ||||| |||||| Sbjct 348630 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCAGACTATAAT 348689 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || |||||| | || || ||| | || | || | ||||| ||| Sbjct 348690 ATCCAGAAAGAGTCTACTCTCCATCTTGTCCTTCGACTCAGAGGTGGT 348737 Score = 102 bits (112), Expect = 1e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | ||||| || || || || || ||||| || ||| Sbjct 350106 ATGCAGATCTTTGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCT 350165 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || ||| || || ||||| |||||||| || || ||||| || Sbjct 350166 GACACCATCGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAG 350225 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||| ||||||||||| |||||| | | || | || || ||||| Sbjct 350226 CAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACGCTCTCTGACTATAAC 350285 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031 || |||||| | || || |||||||| Sbjct 350286 ATTCAAAAAGAGTCAACTCTCCATTTAGT 350314 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| ||||||| | || || || || ||||| || || || || || Sbjct 349422 ATGCAGATCTTTGTTAAAACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCA 349481 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || || |||||| || ||||||||||| || || ||||| || Sbjct 349482 GATACGATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAG 349541 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | ||| ||||| ||||| || ||| |||||| | ||||| || || Sbjct 349542 CAGAGGCTAATCTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 349601 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || ||| | || || ||| | || | | || ||||| ||| Sbjct 349602 ATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGGT 349649 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || | ||||| || || || || || ||||| || ||| Sbjct 349878 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCT 349937 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| || || ||||| || ||||||||||| || || ||||| ||| Sbjct 349938 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGTATCCCCCCAGACCAA 349997 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | ||| |||||||| | |||||| | ||| | ||||| || ||| Sbjct 349998 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGACGTACTCTTTCAGACTACAAT 350057 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || || || | || | || | ||||||||| Sbjct 350058 ATCCAGAAAGAATCTACTCTCCACCTTGTTCTTAGGCTCAGAGGCGGT 350105 >seq6499 Length=11414 Score = 125 bits (138), Expect = 1e-23 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | |||||| | ||||| || ||||| || | ||||| || || Sbjct 671 ATGCAAATCTTTGTAAAAACACTTACTGGCAAGACTATCACCCTGGAAGTAGAGCCATCA 612 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || ||||| || || ||||| |||||||| || || ||||| || Sbjct 611 GATACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAG 552 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | || ||||||||||| |||||| |||||| | || ||||| || Sbjct 551 CAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGAACTCTCTCTGATTACAAC 492 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || || ||| ||| | ||||||||| | || | |||| ||||| || Sbjct 491 AT-TCAAAAGGAGTCAACGCTTCATCTGGTCCTTCGATTGAGAGGAGG 445 Score = 122 bits (134), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||||||| | ||||| || || || || | ||||| || ||| Sbjct 443 ATGCAAATCTTTGTTAAAACACTCACTGGTAAGACCATAACCCTGGAAGTGGAGCCGTCT 384 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||| || ||| ||| ||||| ||||| ||||| || |||||||| || Sbjct 383 GACACAATCGAAAATGTAAAAGCTAAGATACAGGATAAGGAAGGTATTCCTCCAGATCAG 324 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||| | || ||||||||||| |||||| | || | ||||| || ||| Sbjct 323 CAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGACGTACACTCTCAGACTACAAT 264 Query 156003 ATATCCAAAG-AGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || |||| || | || || ||| | || | ||||||||||| ||| Sbjct 263 AT-TCAAAAGGAGTCAACCCTCCATCTTGTCCTTAGATTAAGAGGAGGT 216 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| |||| || | || || || || ||||| || || || || || Sbjct 1355 ATGCAGATCTTTGTTAAGACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCA 1296 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || || |||||| || ||||||||||| || || ||||| ||| Sbjct 1295 GATACTATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATCCCACCAGATCAA 1236 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || ||||||| ||| ||||| ||||| || ||| |||||| | ||||| || || Sbjct 1235 CAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 1176 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||| || ||| | || || ||| | || | | || ||||| ||| Sbjct 1175 ATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGGT 1128 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | || ||||| || || || ||||||||||| ||| Sbjct 899 ATGCAGATCTTTGTCAAAACTCTCACAGGAAAGACCATCACCTTAGAAGTCGAGCCATCT 840 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| ||| |||||| || || || ||||||||||| || |||||||| || Sbjct 839 GATACGATTGAAAATGTGAAAGCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGATCAG 780 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| || |||||| | ||||| | | ||| | || || ||||| Sbjct 779 CAGAGGCTGATCTTTGCTGGAAAGCAGTTAGAAGACGGCCGTACTCTCTCTGACTATAAC 720 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || ||||| | || | || || ||||| ||| Sbjct 719 ATTCAGAAAGAATCAACTCTTCACCTTGTTCTTAGGTTGAGAGGTGGT 672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731714446255200