Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq684 143 2e-29 seq6499 141 8e-29 seq295 84.2 2e-11 >seq684 Length=498857 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||||||||| | ||||| ||| | | Sbjct 348966 ATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACTATTACATTAGAAGTTGAACCATCT 349025 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||||||||||||||||| || || |||||| Sbjct 349026 GACACTATTGAAAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAA 349085 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || |||||||| || ||| |||| | || ||||| ||| Sbjct 349086 CAGAGGTTGATATTTGCTGGAAAACAGCTTGAAGATGGAAGAACTCTCTCTGATTACAAC 349145 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || || |||| | || || | || ||||| Sbjct 349146 ATTCAGAAAGAATCCACTCTTCATCTTGTTCTT-CGGCTCCGTGGAGG 349192 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| |||| || || || || || || || || | ||||| | ||||| | Sbjct 350106 ATGCAGATCTTTGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTG-AGCCATC 350164 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| |||||| ||||| ||||||||||||||||| || || ||||| Sbjct 350165 TGACACCATCGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATCA 350224 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || || ||||| || ||| | | | || || ||||| Sbjct 350225 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACGCTCTCTGACTATAA 350284 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||| || || || || || || || ||||| | || ||||| Sbjct 350285 CATTCAAAAAGAGTCAACTCTCCATTTAGTTCTGCGACTTCGTGGAGG 350332 Score = 122 bits (134), Expect = 8e-23 Identities = 156/211 (74%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || || || || |||||||| || || || ||| || | Sbjct 349194 ATGCAAATTTTTGTTAAGACTCTTACTGGCAAGACTATTACTCTTGAGGTGGAACCCTCT 349253 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || ||||||||||| ||||| || || || ||||| Sbjct 349254 GACACTATTGAAAATGTTAAGGCTAAAATCCAAGACAAGGAAGGGATTCCCCCTGATCAG 349313 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 ||||| || || ||||| || || ||| |||||||| ||| ||| | || || ||| Sbjct 349314 CAACGATTAATTTTTGCTGGCAAGCAGTTGGAGGATGGTCG---TACATTATCTGACTAT 349370 Query 24881 AACATTCAAAAGGAATCGACACTACA-CTTG 24910 || |||||||||||||| || || || |||| Sbjct 349371 AATATTCAAAAGGAATCTACTCTGCATCTTG 349401 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| ||||||| || || || || || ||||| | || || | ||||| | Sbjct 349422 ATGCAGATCTTTGTTAAAACTCTCACAGGCAAGACCATTACCTTGGAGGTTG-AGCCATC 349480 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || || || || || || ||||||||||| || || ||||| Sbjct 349481 AGATACGATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCA 349540 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||||||| || |||||||| |||||| |||| | ||||| || || Sbjct 349541 GCAGAGGCTAATCTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAA 349600 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| || ||||| || | || | || ||| | ||||| Sbjct 349601 CATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGG 349648 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| |||| || || || || || | ||||| || || | Sbjct 348282 ATGCAGATCTTTGTGAAAACATTAACTGGCAAGACCATCACCTTGGAAGTGGAGCCCTCT 348341 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| |||||||||||||| ||||| || ||| Sbjct 348342 GATACCATTGAGAATGTTAAGGCTAAGATCCAGGACAAAGAAGGAATCCCTCCAGACCAA 348401 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || || ||||| || ||| ||| |||| || ||||| Sbjct 348402 CAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACGTTGTCTGACTATAAT 348461 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || ||||| ||||| || || || |||| Sbjct 348462 ATCCAAAAAGAATCTACTCTTCATCTTG 348489 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||| || || | ||||| ||| || | Sbjct 349650 ATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTAGAAGTGGAACCCTCT 349709 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | |||| | ||| || ||||| || |||||||| || || || || Sbjct 349710 GATACCATCGAGAATGTTAAAGCTAAA-ATACAAGATAAGGAAGGAATTCCCCCAGACCA 349768 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||||||||| || || || |||| ||| | | | || || || || Sbjct 349769 ACAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCTGACTACAA 349828 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 || || || ||||| || || ||| Sbjct 349829 TATCCAGAAAGAATCTACTCTCCAC 349853 >seq6499 Length=11414 Score = 141 bits (156), Expect = 8e-29 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || |||||||| | |||||||| | | Sbjct 215 ATGCAGATCTTTGTAAAAACACTTACTGGCAAGACTATTACCTTGGAAGTAGAGCCTTCT 156 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||||||||||| || || ||||| Sbjct 155 GACACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 96 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||| ||||| || |||||||| |||||| |||| | ||||| || ||| Sbjct 95 CAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 36 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || |||||||| || ||||| || |||| Sbjct 35 ATACAAAAGGAGTCCACACTCCATCTTG 8 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || || || || ||||| || || |||||||| |||| | Sbjct 671 ATGCAAATCTTTGTAAAAACACTTACTGGCAAGACTATCACCCTGGAAGTAGA-GCCATC 613 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || ||||||||||||||||||||||| || || ||||| Sbjct 612 AGATACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGATCA 553 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||| || || || ||||| || ||| |||| | || ||||| || Sbjct 552 GCAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGAACTCTCTCTGATTACAA 493 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||||||| || || || || |||| | |||||| | |||||| Sbjct 492 CATTCAAAAGGAGTCAACGCTTCATCTGGTCCTTCGATTGAGAGGAGGC 444 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || || || || || || ||||| | || || || |||| | Sbjct 1355 ATGCAGATCTTTGTTAAGACTCTCACAGGCAAGACCATTACCTTGGAGGTTGA-GCCATC 1297 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || || || || || || ||||||||||| || || ||||| Sbjct 1296 AGATACTATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATCCCACCAGATCA 1237 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | ||||| ||||| || |||||||| |||||| |||| | ||||| || || Sbjct 1236 ACAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAA 1177 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| || ||||| || | || | || ||| | ||||| Sbjct 1176 CATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGG 1129 Score = 118 bits (130), Expect = 1e-21 Identities = 154/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| || || ||||| || || || || ||||| || | | Sbjct 443 ATGCAAATCTTTGTTAAAACACTCACTGGTAAGACCATAACCCTGGAAGTGGAGCCGTCT 384 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| |||||| ||||| || || || ||||| || ||||| ||||| Sbjct 383 GACACAATCGAAAATGTAAAAGCTAAGATACAGGATAAGGAAGGTATTCCTCCAGATCAG 324 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | |||||||| || || || ||||| || ||| || ||| | ||||| || || Sbjct 323 CAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATG-GACGTACACTCTCAGACTACAA 265 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||||||||| || || || || |||| Sbjct 264 TATTCAAAAGGAGTCAACCCTCCATCTTG 236 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| | ||||| || || || || || || || | ||||| | ||||| | Sbjct 899 ATGCAGATCTTTGTCAAAACTCTCACAGGAAAGACCATCACCTTAGAAGTCG-AGCCATC 841 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | |||| || ||| |||||| || || |||||||| || ||||| ||||| Sbjct 840 TGATACGATTGAAAATGTGAAAGCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGATCA 781 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || ||| | || || | | | || || ||||| Sbjct 780 GCAGAGGCTGATCTTTGCTGGAAAGCAGTTAGAAGACGGCCGTACTCTCTCTGACTATAA 721 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 |||||| || ||||| || || ||| Sbjct 720 CATTCAGAAAGAATCAACTCTTCAC 696 >seq295 Length=498498 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| || ||||| | || | |||||||||||| || || |||| ||||| ||| || Sbjct 334500 TATTCTACTATTTCAGTGCAAAGATTACTACACTTAATAGTTCCTAGATTTTTTTGGTTT 334559 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 ||| | ||||| ||||||||||| | ||| || || || ||||| ||||| | | Sbjct 334560 GATTTCCTATTACACGCATCTTTGTATAACATGTAAGGGACACCTGTTTCAACTTGAGCC 334619 Query 139243 TCTATAATG 139251 ||||| ||| Sbjct 334620 TCTATTATG 334628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449800748294160