Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq449 96.9 5e-14 >seq449 Length=447757 Score = 96.9 bits (106), Expect = 5e-14 Identities = 172/247 (70%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||| |||||||| || || || || ||||||||| | |||| ||| || | | Sbjct 357335 TGTACTTAGTGACGGCTTTTGTCCCTTCGCTAACGGCGTGCTTAGCCAATTCACCAGGGA 357276 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTG--CGCTTGTT--A 1485585 | || | ||| |||||||||||||| | | ||| ||||| ||||| || | Sbjct 357275 GAAGAAGCCTCACTGCGGTCTGGATCTCCCTAGAAGTGAT--TGTTGACCGCTTATTGTA 357218 Query 1485586 GTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAG 1485645 ||| | | || | | || || | |||| || |||| ||||||||||| || | Sbjct 357217 GTGGGAG--AGCCTGGAAGCTTCAGCAGCGATACGCTCGAAGATGTCGTTGACGAAACTG 357160 Query 1485646 TTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACC 1485705 |||||||| ||||| ||| ||||| || ||||||||| ||||| || | |||| Sbjct 357159 TTCATGATGCTCATCGCCTTGGATGAGATACCGGTGTCGGGGTGAACCTGTTTCAACACC 357100 Query 1485706 TTGTAAA 1485712 ||||||| Sbjct 357099 TTGTAAA 357093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914414417310458