Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq6499 98.7 2e-15 >seq6499 Length=11414 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/139 (75%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC------ 81697 ||||| |||| ||||| || ||||| ||||| ||||| | | |||||||||| Sbjct 700 AGAGTTGATTCTTTCTGAATGTTATAGTCAGAGAGAGTACGGCCGTCTTCTAACTGCTTT 759 Query 81698 -----AAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 |||||| || || || ||| ||||| | || |||| ||||| |||||||||||| Sbjct 760 CCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAATCTTTGCT 819 Query 81753 TTTATATTTTCAATCGTAT 81771 || | |||||||||||||| Sbjct 820 TTCACATTTTCAATCGTAT 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903216718153920