Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq295 107 5e-18 >seq295 Length=498498 Score = 107 bits (118), Expect = 5e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 110522 TTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGA 110581 ||| || || |||| || | ||||| ||||||||| ||||| || || | || | Sbjct 344937 TTGTTTCCTCCTAGCTATGCAAGATGACAGTATTGAAGGCATTTACAATACTTTGAAGCA 344878 Query 110582 AACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTC 110641 ||| ||||| || || |||| |||| || ||||| | ||| ||||| ||||| || Sbjct 344877 AACAGCTCTCATATCCAAAACTGCTGGTGGTATTGGATTGCACATTCATTGCATTCGTTC 344818 Query 110642 AAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAG 110701 ||||| || ||| || | | || || |||| |||| ||||||||||||| || Sbjct 344817 CAAAGGGACATTTATTGCTGGAACTAATGGAATATCAAATGGAATTGTTCCAATGTTGAG 344758 Query 110702 AGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA 110743 || ||||| ||||||||| |||||| | ||||| || || Sbjct 344757 GGTATTCAATAACACTGCAAGATATGTAGACCAAGGAGGAAA 344716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186550921596342