Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6499 107 1e-18 seq684 102 5e-17 >seq6499 Length=11414 Score = 107 bits (118), Expect = 1e-18 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| ||| ||| | ||| || ||||| ||||| || ||||| || || | Sbjct 672 ACCACCTCTC-AACCTAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAG 730 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 |||| || || |||| || || || ||||| ||||| |||| | |||||||||| | | Sbjct 731 AGAGAGTACGGCCGTCTTCTAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGAG 790 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||||||| || ||| || || || |||| || | || || || || Sbjct 791 GAATACCTTCTTTATCCTGAATCTT-TGCTTTCACATTTTCAATCGTATCAGATGGCTCG 849 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || || ||||| | ||||| |||||||||||||| Sbjct 850 ACTTCTAAGGTGATGGTCTTTCCTGTGAGAGTTTTGACAAAGATCTGCAT 899 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||||||| | || | ||| || ||| ||| |||||||||||||| || || Sbjct 1128 ACCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGA 1187 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | | || || | ||||| || ||||||||||| | ||| |||||| | || Sbjct 1188 GAGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGG 1247 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| | | |||| || | || || || || | Sbjct 1248 GATTCCTTCTTTATCCTGAATTTT-AGCCTTGACATTTTCAATAGTATCTGATGGCTCAA 1306 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||| | || || ||||||||||||||| Sbjct 1307 CCTCCAAGGTAATGGTCTTGCCTGTGAGAGTCTTAACAAAGATCTGCATA 1356 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||| ||| |||||||||||||| || ||||| || | | | || || | || Sbjct 12 ATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCCTCAAGCTG 71 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| || ||||||||||| | |||||||||| | || | ||||||||||| || || Sbjct 72 TTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 131 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 ||| |||| || | ||||| | || || || | || || || || || | Sbjct 132 GGCCTTC-ACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGTCTTGCCAG 190 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | | ||||||||||||||||||||| Sbjct 191 TAAGTGTTTTTACAAAGATCTGCATA 216 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| || | |||| ||| || || ||| ||||| ||||||||||| ||| Sbjct 445 CCTCCTCTCAATCGAAGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAG 504 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || || | || || || || || ||||| | |||||||||| | || Sbjct 505 AGAGTTCTTCCATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGA 564 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || ||| |||| || | || || || || || Sbjct 565 ATTCCTTCTTTGTCTTGGATCTTGGCCTTC-ACATTCTCAATAGTATCTGATGGCTCTAC 623 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | |||||||||||||| |||||| Sbjct 624 TTCCAGGGTGATAGTCTTGCCAGTAAGTGTTTTTACAAAGATTTGCATA 672 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | || | || | ||| ||||| |||||| || || || || || || Sbjct 901 CCACCTCTGAGGCGAAGGACTAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAA 960 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || ||||||||||| || || || ||||| | ||| |||||| | || Sbjct 961 AGAGTACGACCATCTTCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGAGGG 1020 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || || || || || | || ||||| || | ||| || | |||||| Sbjct 1021 ATTCCCTCCTTATCCTGTATCTT-AGCTTTAACATTTTCAATGGTATCAGAGGGTTCCAC 1079 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| ||||||||||| | || || ||||| ||||||||| Sbjct 1080 TTCTAAAGTGATGGTTTTACCTGTGAGTGTCTTCACAAAAATCTGCATA 1128 >seq684 Length=498857 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||||||| | || | ||| || ||| ||| |||||||||||||| || || Sbjct 349649 ACCTCCTCTCAAACGAAGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGA 349590 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || | | | || || | ||||| || ||||| || | | |||||||||| | || Sbjct 349589 GAGAGTTCTTCCATCCTCAAGCTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGTGG 349530 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||||| || |||||| | | |||| || | || || || || | Sbjct 349529 AATTCCTTCTTTATCCTGAATTTT-AGCCTTGACATTTTCAATCGTATCTGATGGCTCAA 349471 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || || ||||| | ||||| ||||||||||||||| Sbjct 349470 CCTCCAAGGTAATGGTCTTGCCTGTGAGAGTTTTAACAAAGATCTGCATA 349421 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 || ||||| ||||| ||||||||| ||||| || || ||||| || || | || || Sbjct 350314 ACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAGAGCGTACGGCCATCTTCA 350255 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || || ||||| ||||| | |||||||||| | || | ||||||||||| | Sbjct 350254 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCTTGA 350195 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || | || |||| || | |||||| || || || || | ||||| || || Sbjct 350194 ATCTT-GGCTTTTACATTTTCGATGGTGTCAGATGGCTCAACTTCCAAGGTGATGGTCTT 350136 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || ||||||||||||||| Sbjct 350135 GCCAGTAAGAGTCTTAACAAAGATCTGCATA 350105 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | || | || | ||| ||||| |||||| || || || || || || Sbjct 348737 ACCACCTCTGAGTCGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGA 348678 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || |||||||| || || ||||| ||||| | ||| || ||| | || Sbjct 348677 AAGAGTACGGCCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGG 348618 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | |||||||| || ||||||| || ||||| ||| || || | || | Sbjct 348617 GATTCCTTCTTTATCCTGAATTTTCGCCTT-AACATTTTCAATTGTATCAGACGGCTCAA 348559 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| | || |||||||||||||||||| Sbjct 348558 CTTCCAAGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAAGATCTGCATA 348509 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| |||||| ||||| || ||||||||||| ||||| || | | | || || | || Sbjct 349169 ATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATCTTCAAGCTG 349110 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 |||||| ||||| ||||| | ||| |||||| | || | ||||||||||| || || Sbjct 349109 TTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGGATCTT 349050 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | |||| || | ||||| || ||| || || | || || ||||| || | Sbjct 349049 -AGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGTTTTGCCAG 348991 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | ||||| ||||| |||||||| Sbjct 348990 TAAGAGTTTTCACAAAAATCTGCAT 348966 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || || ||||| || || || || ||| | || |||||||| || || ||||| Sbjct 350068 TCTTTCTGGATATTGTAGTCTGAAAGAGTACGTCCATCTTCCAATTGCTTACCAGCAAAG 350009 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 ||||| | ||| || ||| | || | ||||||||| || ||||||| || ||||| Sbjct 350008 ATCAACCTCTGTTGGTCTGGGGGGATACCTTCTTTATCCTGAATTTTCGCCTT-AACATT 349950 Query 33679 GTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| || || || || || || | ||||| || || || || | || || || Sbjct 349949 TTCAATTGTATCAGATGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTAAC 349890 Query 33738 AAAGATCTGCATA 33750 |||||||||||| Sbjct 349889 GAAGATCTGCATA 349877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328635007290240