Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq684 131 4e-25 seq6499 129 1e-24 >seq684 Length=498857 Score = 131 bits (144), Expect = 4e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || ||||| |||||||| ||||||||| ||||| Sbjct 349653 CAGATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTAGAAGTGGAACCCTCTGAT 349712 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||| ||| || ||||| || ||||||||| || ||| || Sbjct 349713 ACCATCGAGAATGTTAAAGCTAAA-ATACAAGATAAGGAAGGAATTCCCCCAGACCAACA 349771 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || | ||||| || || ||||| ||||||||||| | ||| | | || ||||| | Sbjct 349772 GAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCTGACTACAATAT 349831 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 ||||||||| |||||||| ||||||||| | || || Sbjct 349832 CCAGAAAGAATCTACTCTCCACCTTGTTCTTAGGCT 349867 Score = 116 bits (128), Expect = 9e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || ||||| || || || ||||| ||| |||||| Sbjct 348969 CAGATTTTTGTGAAAACTCTTACTGGCAAAACTATTACATTAGAAGTTGAACCATCTGAC 349028 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| ||||| ||||| ||||||||||| || || || Sbjct 349029 ACTATTGAAAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAACAG 349088 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || ||||| ||| | ||||||||||| ||| | | ||||||||| | Sbjct 349089 AGGTTGATATTTGCTGGAAAACAGCTTGAAGATGGAAGAACTCTCTCTGATTACAACATT 349148 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 |||||||| || |||||||| |||||| Sbjct 349149 CAGAAAGAATCCACTCTTCATCTTGTT 349175 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || |||||||| || || ||||| |||||||| || ||||| Sbjct 348513 CAGATCTTTGTAAAGACTCTCACAGGCAAGACCATCACCTTGGAAGTTGAGCCGTCTGAT 348572 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| || ||||| || ||||||||||| || ||| || Sbjct 348573 ACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGAATCCCCCCAGACCAACAG 348632 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| || || ||||| ||||||||||| | ||| | | || || || || Sbjct 348633 AGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCAGACTATAATATC 348692 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||||||||| || ||||| Sbjct 348693 CAGAAAGAGTCTACTCTCCATCTTGT 348718 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||||||| || ||||| ||| | ||| Sbjct 349893 AAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCTGATACAATTGAAAAT 349952 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || |||||||| || || ||| || || | ||||| Sbjct 349953 GTTAAGGCGAAAATTCAGGATAAAGAAGGTATCCCCCCAGACCAACAGAGGTTGATCTTT 350012 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| |||||||||||| | ||| | | || ||||| |||||||||| ||| Sbjct 350013 GCTGGTAAGCAATTGGAAGATGGACGTACTCTTTCAGACTACAATATCCAGAAAGAATCT 350072 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 ||||| ||||||||| | || || Sbjct 350073 ACTCTCCACCTTGTTCTTAGGCT 350095 Score = 105 bits (116), Expect = 2e-17 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| ||||| ||| ||||| | || || || || ||||| ||||||||||| Sbjct 348279 AAAATG---CAGATCTTTGTGAAAACATTAACTGGCAAGACCATCACCTTGGAAGTGGAG 348335 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||| || | || || ||| ||||| || || ||||||||||| || Sbjct 348336 CCCTCTGATACCATTGAGAATGTTAAGGCTAAGATCCAGGACAAAGAAGGAATCCCTCCA 348395 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||||| | || || || ||||||||| | |||||||| | || ||| | || Sbjct 348396 GACCAACAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACGTTGTCTGAC 348455 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || |||| ||||| ||||||||||| ||||| | ||||| Sbjct 348456 TATAATATCCAAAAAGAATCTACTCTTCATCTTGTCCTTAGACT 348499 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || ||||| |||||||| || |||||| Sbjct 350109 CAGATCTTTGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCTGAC 350168 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| ||||| ||||||||||| |||||||||||| || || || Sbjct 350169 ACCATCGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAGCAG 350228 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| || || |||||| | |||||||| | || | | || || ||| | Sbjct 350229 AGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACGCTCTCTGACTATAACATT 350288 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||| ||||| || | ||| || ||||||| Sbjct 350289 CAAAAAGAGTCAACTCTCCATTTAGTTCTGCGACTTCG 350326 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 ||||| | ||||| ||||||||||| ||||| |||| ||||||||||| ||| || | Sbjct 348499 AGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGACAACGTTCGG 348440 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||| ||||||||||| || || || | || |||||| Sbjct 348439 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTG 348399 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| |||||||| || || || || ||||| || || || || Sbjct 349425 CAGATCTTTGTTAAAACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCAGAT 349484 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || ||||| || |||||||||||| || || || Sbjct 349485 ACGATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAGCAG 349544 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || || ||| | || |||||||| ||| | | || |||||| | Sbjct 349545 AGGCTAATCTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAACATA 349604 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| || || || ||||| Sbjct 349605 CAAAAGGAGTCCACACTCCATCTTGT 349630 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 204755 AGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTT 204814 || || | ||||||||| |||||||| |||||||||| ||| ||||| | | ||| | | Sbjct 350095 AGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTACGT 350036 Query 204815 CCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||||| ||||| || || ||||| | || ||||| Sbjct 350035 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTG 349995 >seq6499 Length=11414 Score = 129 bits (142), Expect = 1e-24 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| ||||||||||| || ||||| || ||||| || ||||| Sbjct 896 CAGATCTTTGTCAAAACTCTCACAGGAAAGACCATCACCTTAGAAGTCGAGCCATCTGAT 837 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || |||||||| |||||| || |||||||| ||| || || || Sbjct 836 ACGATTGAAAATGTGAAAGCAAA-GATTCAGGATAAAGAAGGTATTCCTCCAGATCAGCA 778 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || ||||| || ||||||||||| ||||| || | ||| | | || || ||| | Sbjct 777 GAGGCTGATCTTTGCTGGAAAGCAGTTAGAAGACGGCCGTACTCTCTCTGACTATAACAT 718 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 |||||||| || ||||||||||||||| Sbjct 717 TCAGAAAGAATCAACTCTTCACCTTGTT 690 Score = 109 bits (120), Expect = 1e-18 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || |||||||| ||||| |||||||| ||||||||| ||||| Sbjct 1124 CAGATTTTTGTGAAGACACTCACAGGTAAAACCATCACTTTAGAAGTGGAACCCTCTGAT 1065 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||| || || || || ||||| || || || Sbjct 1064 ACCATTGAAAATGTTAAAGCTAA-GATACAGGATAAGGAGGGAATCCCTCCAGATCAACA 1006 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | |||||||| || || || ||||||||||| | ||| | | || || || | Sbjct 1005 GAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCAGACTATAATAT 946 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 |||||||||||||||||| || || || Sbjct 945 CCAGAAAGAGTCTACTCTCCATCTAGT 919 Score = 93.3 bits (102), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || ||||| ||||||| || || || || | || Sbjct 656 AAAACACTTACTGGCAAGACTATCACCCTGGAAGTAGAGCCATCAGATACTATTGAGAAT 597 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| |||||||||||| || || || || | |||||| Sbjct 596 GTGAAGGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAGCAGAGGTTGATCTTC 537 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | ||||||||||| ||| | | ||||||||| | || || ||||| Sbjct 536 GCTGGTAAGCAGCTTGAAGATGGAAGAACTCTCTCTGATTACAACATTCAAAAGGAGTCA 477 Query 206365 ACTCTTCACCTTGT 206378 || ||||| || || Sbjct 476 ACGCTTCATCTGGT 463 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || || || || || || |||||||| || ||||||| Sbjct 212 CAGATCTTTGTAAAAACACTTACTGGCAAGACTATTACCTTGGAAGTAGAGCCTTCTGAC 153 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| ||||||||||| || || || Sbjct 152 ACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 93 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || || ||| | || |||||||| ||| | | || |||||| | Sbjct 92 AGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAACATA 33 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| || || || ||||| Sbjct 32 CAAAAGGAGTCCACACTCCATCTTGT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181560023115462