Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq684 140 3e-28 seq6499 104 2e-17 >seq684 Length=498857 Score = 140 bits (154), Expect = 3e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||||||||| || || | | || ||||||||||| || ||||| || ||| Sbjct 348959 ACGAAGGCGCAAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGT 348900 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| | |||||||| | | ||||||| | ||| ||||||||||| || || Sbjct 348899 TCGGCCATCTTCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACC 348840 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||||||| ||||||| ||||| | ||| | |||||| | ||||| ||||| | Sbjct 348839 TTCTTTATCCTGAATTTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAA 348780 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || |||||||| | ||||||||||| Sbjct 348779 GGTGATGGTCTTTCCTGTTAGAGTTTTCACAAAAATCTGCAT 348738 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||| ||||| | ||||||||||||||||||| ||||| | ||||| | Sbjct 350320 CGCAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAGAGCGTACGGCCA 350261 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| ||||| | | |||| | | ||| |||||||| || || |||||||| Sbjct 350260 TCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTG 350201 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | ||| | || || | ||||| ||||| | || | Sbjct 350200 TCTTGAATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAACTTCCAAGGTGATG 350141 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| ||||| || | || |||||||| Sbjct 350140 GTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCAT 350106 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| ||||||||||| | || | ||| || ||||||||||| | | Sbjct 349615 GACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCCTCAAGCTGTTTACCTGCA 349556 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 ||||||| | ||| |||||||| || || ||||||||||| |||||| || | Sbjct 349555 AAGATTAGCCTCTGCTGATCTGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTGACA 349496 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | ||||| || || | || | || || || || |||||||| Sbjct 349495 TTTTCAATCGTATCTGATGGCTCAACCTCCAAGGTAATGGTCTTGCCTGTGAGAGTTTTA 349436 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 349435 ACAAAGATCTGCAT 349422 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || || |||||||| | ||||| |||||| | || ||||| | | Sbjct 349843 GATTCTTTCTGGATATTGTAGTCAGAAAGAGTACGGCCATCTTCCAATTGCTTACCAGCA 349784 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG-GTAATTTTTTGTTTCAA 132048 |||| | | |||||| ||||| || || ||||| ||||| ||| |||| | || || Sbjct 349783 AAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCCTTATCTTGTA--TTTTAGCTTTAA 349726 Query 132049 CTGT-TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | | || | ||||| | || |||||||| | || | ||||| ||||| ||||||| Sbjct 349725 CATTCTCGATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTTTTGCCAGTAAGAGTTT 349666 Query 132108 TTATGAAAATCTGCAT 132123 | | ||||||||||| Sbjct 349665 TCACAAAAATCTGCAT 349650 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || || || ||||| | ||||| |||||| | || ||||| | | Sbjct 348703 GACTCTTTCTGGATATTATAGTCTGAAAGAGTACGGCCATCTTCCAATTGCTTACCAGCA 348644 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | |||||| ||||| || || ||||||||||| |||||| || | Sbjct 348643 AAGATCAACCTCTGTTGGTCTGGGGGGATTCCTTCTTTATCCTGAATTTTCGCCTTAACA 348584 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | |||||| ||||| | || | || || || || ||||| ||| Sbjct 348583 TTTTCAATTGTATCAGACGGCTCAACTTCCAAGGTGATGGTCTTGCCTGTGAGAGTCTTT 348524 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 348523 ACAAAGATCTGCAT 348510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || || |||||||| | ||||| |||||| | || ||||| | | Sbjct 350071 GATTCTTTCTGGATATTGTAGTCTGAAAGAGTACGTCCATCTTCCAATTGCTTACCAGCA 350012 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | | |||||| ||||| || || ||||||||||| |||||| || | Sbjct 350011 AAGATCAACCTCTGTTGGTCTGGGGGGATACCTTCTTTATCCTGAATTTTCGCCTTAACA 349952 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | ||||| ||||| | || | || || ||||| ||||| || Sbjct 349951 TTTTCAATTGTATCAGATGGCTCAACTTCCAAGGTGATGGTCTTGCCAGTAAGAGTCTTA 349892 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 349891 ACGAAGATCTGCAT 349878 >seq6499 Length=11414 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 |||| ||||| |||||||| ||||| | ||||| ||||| | ||| || || | Sbjct 704 TTGATTCTTTCTGAATGTTATAGTCAGAGAGAGTACGGCCGTCTTCTAACTGCTTTCCAG 763 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| || | ||| ||||||||||| || ||||||||||| ||| ||| ||||| Sbjct 764 CAAAGATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTATCCTGAATCTTTGCTTTCA 823 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | ||||| | ||||| ||||| | || | || || || || ||||||| Sbjct 824 CATTTTCAATCGTATCAGATGGCTCGACTTCTAAGGTGATGGTCTTTCCTGTGAGAGTTT 883 Query 132108 TTATGAAAATCTGCATG 132124 | | || ||||||||| Sbjct 884 TGACAAAGATCTGCATG 900 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 131920 ATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTG 131979 ||| | | ||||||| |||||||| |||||||| | ||||| |||||| ||||| Sbjct 240 ATGGAGGGTTGACTCCTTTTGAATATTGTAGTCTGAGAGTGTACGTCCATCTTCAAGCTG 299 Query 131980 TTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTT 132039 ||||| | |||| | | ||| ||||||||||| || ||||| ||||| || || Sbjct 300 CTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCCTGTATCTT 359 Query 132040 TTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGT 132099 ||| | | ||| | || || | |||||||||||| | || | || |||||||| Sbjct 360 AGCTTTTACATTTTCGATTGTGTCAGACGGCTCCACTTCCAGGGTTATGGTCTTACCAGT 419 Query 132100 CAGAGTTTTTATGAAAATCTGCATGACT 132127 || ||||| | || || |||||| || Sbjct 420 GAGTGTTTTAACAAAGATTTGCATGCCT 447 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| ||||||||||| | || | ||| || ||||||||||| | | Sbjct 1162 GACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCCTCAAGCTGTTTACCTGCA 1221 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || | | |||||||||||| || || ||||||||||| |||||| || | Sbjct 1222 AAAATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTATCCTGAATTTTAGCCTTGACA 1281 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | |||||| | ||||| || || | || | || || || || ||||| || Sbjct 1282 TTTTCAATAGTATCTGATGGCTCAACCTCCAAGGTAATGGTCTTGCCTGTGAGAGTCTTA 1341 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 1342 ACAAAGATCTGCAT 1355 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || || || ||||| | ||||| |||||| | |||||||| | Sbjct 934 GACTCTTTCTGGATATTATAGTCTGAAAGAGTACGACCATCTTCCAATTGTTTACCAGCG 993 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT-CGGTAATTTTTTGTTTCAA 132048 |||| | | ||||||||||||||| || || || |||| | ||| | || | || || Sbjct 994 AAGATCAATCTCTGTTGATCTGGAGGGATTCCCTCCTTATCCTGTA--TCTTAGCTTTAA 1051 Query 132049 C-TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | | ||| | ||||| | || |||||||| | || | |||||||| || || || | Sbjct 1052 CATTTTCAATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTTTTACCTGTGAGTGTCT 1111 Query 132108 TTATGAAAATCTGCAT 132123 | | ||||||||||| Sbjct 1112 TCACAAAAATCTGCAT 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476508597523920