Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq980 89.7 6e-13 >seq980 Length=337795 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 32712 GATACTATTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATAC 32771 ||||| | ||||||||| | || || ||| || ||| | | ||| | || || || Sbjct 175687 GATACGTTCTTCTTCATACTCAGGAAAAAAGAAAAACAATTAACCTTCCTTCATGTGTAT 175746 Query 32772 CACCATTTTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 ||||| | || ||||| | | | ||||| || ||||||||| || | | ||| Sbjct 175747 CACCACTCAACTATGTTCTCCCTGTGGTGGATTGGAATTAAATGGGTTCCCAGTGGATCA 175806 Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891 | || || ||| | | ||||| ||||| |||||| | |||||| ||||| ||| Sbjct 175807 ACCTTCTTACCAGCCATGGTCAATTCATTTATCCATGTTCTCATGTATTCATATTATGGA 175866 Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATC 32951 || ||||| | ||||| | |||||||| ||||||||||||||| | || || Sbjct 175867 TTGTCAGCACTGGGTCCAAATATAGCCAAATATCTTTGGTGGAAAAAATATCTCACAATG 175926 Query 32952 ATACAATTG 32960 ||||| || Sbjct 175927 CTACAACTG 175935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603050950253280