Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6499 136 3e-27 seq684 131 1e-25 seq686 98.7 9e-16 seq1688 95.1 1e-14 >seq6499 Length=11414 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||||||||| || || |||||| |||| || || ||||| || || || Sbjct 671 ATGCAAATCTTTGTAAAAACACTTACTGGCAAGACTATCACCCTGGAAGTAGAGCCATCA 612 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || || || |||||||||||||| || ||||| ||||| Sbjct 611 GATACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAG 552 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || || || | ||||| | || | || ||||||||| Sbjct 551 CAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGAACTCTCTCTGATTACAAC 492 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||||||||| || | ||| |||| | || ||| | || ||||| Sbjct 491 ATTCAAAAGGAGTCAACGCTTCATCTGGTCCTTCGATTGAGAGGAGGCAT 442 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| || || |||||| ||||||| | ||||| || || || Sbjct 215 ATGCAGATCTTTGTAAAAACACTTACTGGCAAGACTATTACCTTGGAAGTAGAGCCTTCT 156 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || |||||||||||||| || ||||| ||||| Sbjct 155 GACACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAG 96 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || ||||| | || || | || | || || |||||| Sbjct 95 CAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 36 Query 27168 ATTCAAAAGGAGTCGAC 27184 || ||||||||||| || Sbjct 35 ATACAAAAGGAGTCCAC 19 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || |||||| | ||||| | || || || || || Sbjct 1355 ATGCAGATCTTTGTTAAGACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCA 1296 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| |||||||| || |||||||| || ||||| |||||| Sbjct 1295 GATACTATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATCCCACCAGATCAA 1236 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || ||||| | || || | || | || || |||||| Sbjct 1235 CAGAGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 1176 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||| | || | |||||| | || || || Sbjct 1175 ATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGGTAT 1126 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| ||||| || || || ||| | || || || |||||||| ||||| Sbjct 444 CATGCAAATCTTTGTTAAAACACTCACTGGTAAGACCATAACCCTGGAAGTGGAGCCGTC 385 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | || ||| || || || || || ||||| || || || ||||| Sbjct 384 TGACACAATCGAAAATGTAAAAGCTAAGATACAGGATAAGGAAGGTATTCCTCCAGATCA 325 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | ||| || || || | ||||| | || | || || ||||| Sbjct 324 GCAGAGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGACGTACACTCTCAGACTACAA 265 Query 27167 CATTCAAAAGGAGTCGACCTTACAT 27191 |||||||||||||| ||| | ||| Sbjct 264 TATTCAAAAGGAGTCAACCCTCCAT 240 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || || || | || ||| | ||||||||||| || Sbjct 1127 ATGCAGATTTTTGTGAAGACACTCACAGGTAAAACCATCACTTTAGAAGTGGAACCCTCT 1068 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || || || || || || || || || || |||||| Sbjct 1067 GATACCATTGAAAATGTTAAAGCTAAGATACAGGATAAGGAGGGAATCCCTCCAGATCAA 1008 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| || |||||||||||||| || || |||| || || || Sbjct 1007 CAGAGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCAGACTATAAT 948 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | ||| | || | || | | |||||||| Sbjct 947 ATCCAGAAAGAGTCTACTCTCCATCTAGTCCTTCGCCTCAGAGGTGGCAT 898 >seq684 Length=498857 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || ||||| ||||||| | ||||| ||||| || Sbjct 348966 ATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACTATTACATTAGAAGTTGAACCATCT 349025 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||||||||| || ||||| |||||| Sbjct 349026 GACACTATTGAAAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAA 349085 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || |||| || || ||||| | ||||| | || | || ||||||||| Sbjct 349086 CAGAGGTTGATATTTGCTGGAAAACAGCTTGAAGATGGAAGAACTCTCTCTGATTACAAC 349145 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 ||||| || || || || | ||| | ||| Sbjct 349146 ATTCAGAAAGAATCCACTCTTCATCTTGTT 349175 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || |||||| ||||||||||||| |||||||| || Sbjct 349194 ATGCAAATTTTTGTTAAGACTCTTACTGGCAAGACTATTACTCTTGAGGTGGAACCCTCT 349253 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||| |||||||| ||||| || || || ||||| Sbjct 349254 GACACTATTGAAAATGTTAAGGCTAAAATCCAAGACAAGGAAGGGATTCCCCCTGATCAG 349313 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || ||||| | || ||||| || ||||| || || || | || || || || Sbjct 349314 CAACGATTAATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACATTATCTGACTATAAT 349373 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||||||||| || || Sbjct 349374 ATTCAAAAGGAATCTAC 349390 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || |||||| | ||||| | || || || || || Sbjct 349422 ATGCAGATCTTTGTTAAAACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCA 349481 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | ||||| |||||||| || |||||||| || ||||| ||||| Sbjct 349482 GATACGATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAG 349541 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | |||| | || || ||||| | || || | || | || || |||||| Sbjct 349542 CAGAGGCTAATCTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAAC 349601 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||| | || | |||||| | || || || Sbjct 349602 ATACAAAAGGAGTCCACACTCCATCTTGTACTTCGTTTGAGAGGAGGTAT 349651 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || |||||| | || || | ||||| || || || Sbjct 350106 ATGCAGATCTTTGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCT 350165 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||||||||||||||| || ||||| ||||| Sbjct 350166 GACACCATCGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAG 350225 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || | ||||| | || | || || || ||| Sbjct 350226 CAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACGCTCTCTGACTATAAC 350285 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 |||||||| ||||| || | ||||| ||| |||| Sbjct 350286 ATTCAAAAAGAGTCAACTCTCCATTTAGTTCTGCG 350320 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || ||||| | || ||| | ||||||||||| || Sbjct 349650 ATGCAGATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTAGAAGTGGAACCCTCT 349709 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| ||||| ||||| || ||||| || || || || ||| Sbjct 349710 GATACCATCGAGAATGTTAAAGCTAAAATACAAGATAAGGAAGGAATTCCCCCAGACCAA 349769 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||||||||||| | || |||| || ||||| Sbjct 349770 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCTGACTACAAT 349829 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || || || || || Sbjct 349830 ATCCAGAAAGAATCTAC 349846 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| ||||| || |||||| | || || | ||||| || ||||| Sbjct 348510 ATGCAGATCTTTGTAAAGACTCTCACAGGCAAGACCATCACCTTGGAAGTTGAGCCGTCT 348569 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || |||||||| || |||||||| || || || || ||| Sbjct 348570 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGAATCCCCCCAGACCAA 348629 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||||||||||| | || |||| || || || Sbjct 348630 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCAGACTATAAT 348689 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || || ||||| || Sbjct 348690 ATCCAGAAAGAGTCTAC 348706 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || |||||| | || || | ||||| || || || Sbjct 349878 ATGCAGATCTTCGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCT 349937 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || |||||||| || |||||||| || || || || ||| Sbjct 349938 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGTATCCCCCCAGACCAA 349997 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || ||||||||||| | || |||| || ||||| Sbjct 349998 CAGAGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGACGTACTCTTTCAGACTACAAT 350057 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || || || || || Sbjct 350058 ATCCAGAAAGAATCTAC 350074 >seq686 Length=381144 Score = 98.7 bits (108), Expect = 9e-16 Identities = 89/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 135649 AGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTT 135708 ||| || |||||||||||||| || | ||||||||||| ||||||||| | || || Sbjct 39274 AGGATGCATGTGGTCTATTTGTGGCATTCACGATCAAGGCTGGAAGGAGAGACCTGTTTT 39333 Query 135709 TGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTA 135760 ||| |||||||| || ||||| |||| || || |||||||||||||||| Sbjct 39334 TGGAAAGATTCGATACATGAATTATGCTGGCTGCCAAAGAAAATTTAATGTA 39385 >seq1688 Length=171348 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || ||| ||||||| ||||| || || || || Sbjct 124491 ATGCAGATTTTTGTCAAAACCCTCACGGGTAAGACTATTACCCTTGAGGTAGAGCCTTCA 124550 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| || || ||||| || || || || || Sbjct 124551 GACACCATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAG 124610 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | ||||| | || || |||||||||||||| Sbjct 124611 CAGAGGTTAATTTTTGCTGGTAAACAATTGGAAGA 124645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434824772941440