Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq684 158 3e-33 seq6499 149 1e-30 seq1688 132 1e-25 >seq684 Length=498857 Score = 158 bits (174), Expect = 3e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| || || | || ||||| ||||||||||| |||||||| || | || Sbjct 350330 TCCACGAAGTCGCAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAGAG 350271 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | |||||||| |||||||| || || ||||| | | || || || || |||| Sbjct 350270 CGTACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGAAT 350211 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||| ||||| || ||||| ||| || ||||||||||||||||| ||||| || Sbjct 350210 TCCTTCTTTGTCTTGAATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAACTTC 350151 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| || || |||||||| ||||| | |||||| Sbjct 350150 CAAGGTGATGGTCTTGCCAGTAAGAGTCTTAACAAAGATCTGCAT 350106 Score = 156 bits (172), Expect = 1e-32 Identities = 167/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 ||||| |||||||| |||||||| || ||||||||||| ||||| || | | || | Sbjct 348499 AGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGACAACGTTCGG 348440 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||| |||||||| || || || || | | ||||||||| ||||| | |||||| Sbjct 348439 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGGATTCCTTCT 348380 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 |||||||||||||| || || || || ||||| |||||| || || || | ||| Sbjct 348379 TTGTCCTGGATCTTAGCCTTAACATTCTCAATGGTATCAGAGGGCTCCACTTCCAAGGTG 348320 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || || | || || ||||| | ||||||||| Sbjct 348319 ATGGTCTTGCCAGTTAATGTTTTCACAAAGATCTGCATTTT 348279 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| |||||||| || ||||| |||||||| ||||| ||||| || | ||| || | Sbjct 348727 AGTCGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAAAGAGTACGG 348668 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||| ||||| || || ||||| | | |||||||| || || | |||||| Sbjct 348667 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCTTCT 348608 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| || || || || ||||| || || ||||| ||||| || | ||| Sbjct 348607 TTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGACGGCTCAACTTCCAAGGTG 348548 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||||||||||||||| | |||||| Sbjct 348547 ATGGTCTTGCCTGTGAGAGTCTTTACAAAGATCTGCAT 348510 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959 || |||||||| || ||||| || || ||||| || ||||| || | | || | ||| Sbjct 349408 CTAAGGACAAGATGCAGAGTAGATTCCTTTTGAATATTATAGTCAGATAATGTACGACCA 349349 Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019 || |||| ||||||||| || || || | ||||| || ||||| |||| ||||||||| Sbjct 349348 TCCTCCAACTGCTTGCCAGCAAAAATTAATCGTTGCTGATCAGGGGGAATCCCTTCCTTG 349289 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079 || ||||| || || || ||||| || ||||||||| ||| ||||| ||||| || Sbjct 349288 TCTTGGATTTTAGCCTTAACATTTTCAATAGTGTCAGAGGGTTCCACCTCAAGAGTAATA 349229 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 ||||| || || |||||||| ||||| | |||||| Sbjct 349228 GTCTTGCCAGTAAGAGTCTTAACAAAAATTTGCATT 349193 Score = 141 bits (156), Expect = 2e-28 Identities = 167/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | || ||||| ||||||||||| ||||| || ||||| ||||| | || Sbjct 349190 TCCACGGAGCCGAAGAACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAG 349131 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || ||||||||||| ||||| || || || || || | | ||||| || || || | Sbjct 349130 AGTTCTTCCATCTTCAAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGAT 349071 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||| ||||| |||||||| || || ||||| || |||||||| |||||| || Sbjct 349070 TCCTTCTTTGTCTTGGATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTC 349011 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | || || || || || || ||||| || ||||| | ||||||| Sbjct 349010 TAATGTAATAGTTTTGCCAGTAAGAGTTTTCACAAAAATCTGCATT 348965 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | | || | |||||||||||| |||||||| || ||||| || | | ||| Sbjct 348959 ACGAAGGCGCAAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGT 348900 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| | || || ||||| ||||| || | || || || ||||||| || Sbjct 348899 TCGGCCATCTTCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACC 348840 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| || ||||| || ||| |||||| ||||| || || ||||| ||||| || | Sbjct 348839 TTCTTTATCCTGAATTTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCAA 348780 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| || ||||| || ||||| | |||||| Sbjct 348779 GGTGATGGTCTTTCCTGTTAGAGTTTTCACAAAAATCTGCAT 348738 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 || || || |||||||| ||||| || ||||| ||||| || || || | ||| || | | Sbjct 350095 AGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTACGT 350036 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||| ||||| || || ||||| | | |||||||| || || | ||||| Sbjct 350035 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATACCTTCT 349976 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 || ||||| || || || || ||||| || || ||||| ||||| || | ||| Sbjct 349975 TTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGATGGCTCAACTTCCAAGGTG 349916 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| || || | |||||| Sbjct 349915 ATGGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 349878 >seq6499 Length=11414 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959 || || |||||||||||||| || ||||| || |||||||| || | || || | || Sbjct 685 CTAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAGAGAGAGTACGGCCG 744 Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019 ||||| | |||||| || || ||||| || | || || || ||||||| ||||| || Sbjct 745 TCTTCTAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTA 804 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079 ||||| |||||| |||||| ||||| || || ||||| || || || | ||||| Sbjct 805 TCCTGAATCTTTGCTTTCACATTTTCAATCGTATCAGATGGCTCGACTTCTAAGGTGATG 864 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| |||||||| || ||||| | |||||| Sbjct 865 GTCTTTCCTGTGAGAGTTTTGACAAAGATCTGCAT 899 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || ||||| || ||||| ||||| ||||| ||||| | || || ||||||||| Sbjct 460 AGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAGAGAGTTCTTCCATCT 519 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| | | || || || || |||| |||||| ||||| Sbjct 520 TCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCT 579 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || || || || || || || || || || ||||| ||| Sbjct 580 TGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTACTTCCAGGGTGATAGTC 639 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || || |||||||| | ||||| Sbjct 640 TTGCCAGTAAGTGTTTTTACAAAGATTTGCAT 671 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || |||||||| ||||| ||||| || || | || || |||||||| Sbjct 1144 AGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCC 1203 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || ||||| || || | | ||||| || || || | |||||| || ||| Sbjct 1204 TCAAGCTGTTTACCTGCAAAAATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTATCC 1263 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || || || || ||||| || || || || |||||||| | || || ||| Sbjct 1264 TGAATTTTAGCCTTGACATTTTCAATAGTATCTGATGGCTCAACCTCCAAGGTAATGGTC 1323 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| ||||| | |||||| Sbjct 1324 TTGCCTGTGAGAGTCTTAACAAAGATCTGCAT 1355 >seq1688 Length=171348 Score = 132 bits (146), Expect = 1e-25 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 210925 CTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGA 210984 |||| || || ||||| || | || || ||||||||||||| || || || || || | Sbjct 124680 CTTTCTGAATATTATAGTCAGATAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 124621 Query 210985 TAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTT 211044 | | | || ||||||||||||| ||||||||| ||||| ||||| || || |||| Sbjct 124620 TTAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTTT 124561 Query 211045 CGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 |||||||||| || || ||||| || || || ||||| |||||||| || || |||| Sbjct 124560 CGATGGTGTCTGAAGGCTCTACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACAA 124501 Query 211105 ACACCTGCATTTT 211117 | | |||||| || Sbjct 124500 AAATCTGCATATT 124488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158896225142030