Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq684 168 2e-36 seq6499 140 8e-28 seq1688 96.9 8e-15 seq123 89.7 1e-12 >seq684 Length=498857 Score = 168 bits (186), Expect = 2e-36 Identities = 170/221 (77%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| |||||||| || ||||| ||||||||||||| ||| || || | ||| |||| Sbjct 348499 AGTCTAAGGACAAGATGAAGAGTAGATTCTTTTTGGATATTATAGTCAGACAACGTTCGG 348440 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| |||||||| ||||| || || | | ||||||||| || || || ||||| Sbjct 348439 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGTTGGTCTGGAGGGATTCCTTCT 348380 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| ||| || ||||| || |||| ||||| || || ||| Sbjct 348379 TTGTCCTGGATCTTAGCCTTAACATTCTCAATGGTATCAGAGGGCTCCACTTCCAAGGTG 348320 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAtttt 225716 || |||||||| || || ||||| | || | |||||||| Sbjct 348319 ATGGTCTTGCCAGTTAATGTTTTCACAAAGATCTGCATTTT 348279 Score = 154 bits (170), Expect = 4e-32 Identities = 158/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || |||||||||||||| |||||||| |||| |||||| || | | ||| | Sbjct 349867 AGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCAGAAAGAGTACGG 349808 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | ||||| ||||| ||||| | | |||||||| || ||||| |||||| Sbjct 349807 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGAATTCCTTCC 349748 Query 225616 TTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 || ||||| || ||| || || ||| |||||||| || |||| |||||| ||||| || Sbjct 349747 TTATCTTGTAT-TTTAGCTTTAACATTCTCGATGGTATCAGAGGGTTCCACTTCTAAAGT 349689 Query 225675 GATCGTCTTGCCCGTCAAAGTTTT 225698 ||| || ||||| || | |||||| Sbjct 349688 GATGGTTTTGCCAGTAAGAGTTTT 349665 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || |||||||||||||| || | |||||||| | | |||||| |||||| Sbjct 349177 AGAACAAGATGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGAGAGAGTTCTTCCATCT 349118 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||| || || | | ||||| || || || || ||||| |||||| Sbjct 349117 TCAAGCTGTTTTCCAGCAAATATCAACCTCTGTTGATCTGGTGGGATTCCTTCTTTGTCT 349058 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||| || ||||| || | ||| || ||||| || || || Sbjct 349057 TGGATCTTAGCCTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCTAATGTAATAGTT 348998 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAtt 225714 ||||| || | |||||| | || | |||||| Sbjct 348997 TTGCCAGTAAGAGTTTTCACAAAAATCTGCATT 348965 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || |||||||| || ||||| ||||| ||||| | ||| || || | || || | ||| Sbjct 349408 CTAAGGACAAGATGCAGAGTAGATTCCTTTTGAATATTATAGTCAGATAATGTACGACCA 349349 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 || || | |||||| ||||| || || | |||||| || || || ||||| ||||||||| Sbjct 349348 TCCTCCAACTGCTTGCCAGCAAAAATTAATCGTTGCTGATCAGGGGGAATCCCTTCCTTG 349289 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 |||||||| || ||| ||| ||| || ||||| |||| |||||| || | || || Sbjct 349288 TCTTGGATTTTAGCCTTAACATTTTCAATAGTGTCAGAGGGTTCCACCTCAAGAGTAATA 349229 Query 225679 GTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAtt 225714 |||||||| || | ||| || | || | ||||||| Sbjct 349228 GTCTTGCCAGTAAGAGTCTTAACAAAAATTTGCATT 349193 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || |||||||||||||| |||||||| |||| |||||| || | | ||| | Sbjct 350095 AGCCTAAGAACAAGGTGGAGAGTAGATTCTTTCTGGATATTGTAGTCTGAAAGAGTACGT 350036 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | ||||| ||||| ||||| | | |||||||| || || |||||||| Sbjct 350035 CCATCTTCCAATTGCTTACCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATACCTTCT 349976 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 || || || || || ||| ||| ||| || || || || | || || || || ||| Sbjct 349975 TTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGATGGCTCAACTTCCAAGGTG 349916 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAt 225713 || |||||||| || | ||| || | ||| | ||||| Sbjct 349915 ATGGTCTTGCCAGTAAGAGTCTTAACGAAGATCTGCAT 349878 Score = 125 bits (138), Expect = 2e-23 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| ||||||||||||||||| | ||| || || | ||| || Sbjct 348959 ACGAAGGCGCAAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTATAGTCAGACAAGGT 348900 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||||| || || || || ||||| || | || || || || |||||||| Sbjct 348899 TCGGCCATCTTCTAATTGTTTACCTGCAAAGATTAGCCTCTGCTGATCTGGAGGAATACC 348840 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||| || || || || |||||| |||||| ||| || || || || | || || || | Sbjct 348839 TTCTTTATCCTGAAT-TTTTGCTTTCACATTTTCAATAGTATCAGATGGCTCAACTTCCA 348781 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 | ||||| ||||| || || | |||||| Sbjct 348780 AGGTGATGGTCTTTCCTGTTAGAGTTTT 348753 Score = 125 bits (138), Expect = 2e-23 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||| || | |||||||| || |||||||| | || || || | | || Sbjct 350327 ACGAAGTCGCAGAACTAAATGGAGAGTTGACTCTTTTTGAATGTTATAGTCAGAGAGCGT 350268 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||| ||||| | | || || || || ||||| || Sbjct 350267 ACGGCCATCTTCAAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGTGGAATTCC 350208 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| |||||||| ||||| || ||| |||||||||||| || | || || || || Sbjct 350207 TTCTTTGTCTTGAATCTTGGCTTTTACATTTTCGATGGTGTCAGATGGCTCAACTTCCAA 350148 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || | ||| || Sbjct 350147 GGTGATGGTCTTGCCAGTAAGAGTCTT 350121 >seq6499 Length=11414 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || || || || ||||| | |||||||| | | |||||| |||||| Sbjct 460 AGGACCAGATGAAGCGTTGACTCCTTTTGAATGTTGTAATCAGAGAGAGTTCTTCCATCT 519 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | | || || || || ||||| ||||| |||||| Sbjct 520 TCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGTGGAATTCCTTCTTTGTCT 579 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || || || ||||| | || || || | ||||| ||| Sbjct 580 TGGATCTTGGCCTTCACATTCTCAATAGTATCTGATGGCTCTACTTCCAGGGTGATAGTC 639 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAt 225713 ||||| || | ||||||| || | |||||| Sbjct 640 TTGCCAGTAAGTGTTTTTACAAAGATTTGCAT 671 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||| |||||||| ||||| || || || ||||| | |||||| || | | || | || Sbjct 228 TCTAAGGACAAGATGGAGGGTTGACTCCTTTTGAATATTGTAGTCTGAGAGTGTACGTCC 287 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| |||||||| ||||||||||| | | || || || || |||||||||||||| Sbjct 288 ATCTTCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTT 347 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 || || ||||| || ||| |||||| ||||| || | ||||| || | || || Sbjct 348 ATCCTGTATCTTAGCTTTTACATTTTCGATTGTGTCAGACGGCTCCACTTCCAGGGTTAT 407 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAt 225713 ||||| || || | ||||| | || | |||||| Sbjct 408 GGTCTTACCAGTGAGTGTTTTAACAAAGATTTGCAT 443 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225499 CTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCA 225558 || || |||||||| ||||| |||||||| || | || || || | | ||| | || Sbjct 685 CTAAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTATAGTCAGAGAGAGTACGGCCG 744 Query 225559 TCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTG 225618 ||||||| |||||| ||||| ||||| || | || || || || ||||||||||| || Sbjct 745 TCTTCTAACTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATACCTTCTTTA 804 Query 225619 TCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATC 225678 || || |||||| |||||| ||| || || || || | || || ||||| ||||| Sbjct 805 TCCTGAATCTTTGCTTTCACATTTTCAATCGTATCAGATGGCTCGACTTCTAAGGTGATG 864 Query 225679 GTCTTGCCCGTCAAAGTTTT 225698 ||||| || || | |||||| Sbjct 865 GTCTTTCCTGTGAGAGTTTT 884 Score = 114 bits (126), Expect = 3e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || |||||||| || ||||| |||| ||| || || | | ||| | |||||| Sbjct 916 AGGACTAGATGGAGAGTAGACTCTTTCTGGATATTATAGTCTGAAAGAGTACGACCATCT 975 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || ||||||||||| | || ||||| || || || || || ||||| || Sbjct 976 TCCAATTGTTTACCAGCGAAGATCAATCTCTGTTGATCTGGAGGGATTCCCTCCTTATCC 1035 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| || ||| ||| ||||| || |||| |||||| ||||| ||||| || Sbjct 1036 TGTATCTTAGCTTTAACATTTTCAATGGTATCAGAGGGTTCCACTTCTAAAGTGATGGTT 1095 Query 225682 TTGCCCGT 225689 || || || Sbjct 1096 TTACCTGT 1103 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| ||||| ||||| || ||||| | ||||| || | | |||||| ||||| Sbjct 4 AGTACAAGATGGAGTGTGGACTCCTTTTGTATGTTGTAGTCTGAGAGAGTTCTTCCATCC 63 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || || || | | || || || || || || ||||| |||||| Sbjct 64 TCAAGCTGTTTACCTGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCTTTGTCT 123 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| || || ||||| || | || || || || || || ||| Sbjct 124 TGGATCTTGGCCTTCACATTCTCAATAGTGTCAGAAGGCTCTACTTCCAAGGTAATAGTC 183 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAt 225713 ||||| || | ||||||| || | ||||| Sbjct 184 TTGCCAGTAAGTGTTTTTACAAAGATCTGCAT 215 >seq1688 Length=171348 Score = 96.9 bits (106), Expect = 8e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| || | ||| || || | | |||||| |||||||| | || || ||||| || | Sbjct 124680 CTTTCTGAATATTATAGTCAGATAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 124621 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | | | || ||||| || ||||| |||||||| || || ||||| ||| ||| || Sbjct 124620 TTAACCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGAATCTTAGCCTTAACATTTT 124561 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGA 225703 ||||||||||||| | || || || | || || ||||| ||||| | ||||| | | Sbjct 124560 CGATGGTGTCTGAAGGCTCTACCTCAAGGGTAATAGTCTTACCCGTGAGGGTTTTGACAA 124501 Query 225704 ACACTTGCAtttt 225716 | | ||||| || Sbjct 124500 AAATCTGCATATT 124488 >seq123 Length=930890 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || |||||||||||||| || || || || || || || || ||||| || |||||||| Sbjct 320636 AAGATTTGACCATCAGTTATGGAAATGACGTTGGTTGGAATGTAAGCTGACACATCACCA 320577 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 ||||| ||||| | ||| || | ||||| ||||| |||||||| Sbjct 320576 GCTTGAGTTTCAATAACTGGAAGAGCTGTGAGTGAACCACCACC 320533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192268059792068