Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1570 86.0 8e-12 >seq1570 Length=204615 Score = 86.0 bits (94), Expect = 8e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 155934 CCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAA 155993 ||||| || | | |||||| ||||| | ||| ||| |||||||| ||||| |||||| Sbjct 62851 CCAGGCCTAAGAAGTGCTTCATCAATCATGTCCCTTCTATTGGTCATTCCTATAATTAAA 62910 Query 155994 ATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAATTGATTGACTACGGCGTCG 156053 || ||||| | || ||||| |||||||||||||| | ||| ||||| || | ||| Sbjct 62911 ATATTGTTGAGCTGATCAACACCATCTATTTTAGACAAAAGTTGGTTGACAACAGTGTCA 62970 Query 156054 TG 156055 || Sbjct 62971 TG 62972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666931595386320