Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq684 149 2e-30 seq6499 143 6e-29 seq1688 125 2e-23 >seq684 Length=498857 Score = 149 bits (164), Expect = 2e-30 Identities = 170/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || |||||||| | || || || || |||||| | || ||||| Sbjct 348279 AAAATGC---AGATCTTTGTGAAAACATTAACTGGCAAGACCATCACCTTGGAAGTGGAG 348335 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || ||||| ||||| || || ||||| ||||||||||||||||||||||| Sbjct 348336 CCCTCTGATACCATTGAGAATGTTAAGGCTAAGATCCAGGACAAAGAAGGAATCCCTCCA 348395 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||| | | || || || ||||| ||||| |||||||| | || | | || Sbjct 348396 GACCAACAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACGTTGTCTGAC 348455 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||||||||||| || || |||||||| | ||||| ||| Sbjct 348456 TATAATATCCAAAAAGAATCTACTCTTCATCTTGTCCTTAGACTGAGA 348503 Score = 149 bits (164), Expect = 2e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||||||||| || || ||||| || || | || || ||| || ||| Sbjct 348969 CAGATTTTTGTGAAAACTCTTACTGGCAAAACTATTACATTAGAAGTTGAACCATCTGAC 349028 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||||| || ||||||||||||||||| || || || || Sbjct 349029 ACTATTGAAAATGTCAAGGCTAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAACAG 349088 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || ||||||||||| ||||||||||| ||||| | ||||| ||| | Sbjct 349089 AGGTTGATATTTGCTGGAAAACAGCTTGAAGATGGAAGAACTCTCTCTGATTACAACATT 349148 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || |||||||| || || ||||||||| Sbjct 349149 CAGAAAGAATCCACTCTTCATCTTGTT 349175 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || |||||||||||||| || || || ||| | ||||| || ||||| Sbjct 349425 CAGATCTTTGTTAAAACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCAGAT 349484 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| || |||||||| ||||||||||| || || || ||||| Sbjct 349485 ACGATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAGCAG 349544 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || || |||||||| || |||||||| ||||| | || || ||| | Sbjct 349545 AGGCTAATCTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAACATA 349604 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || ||||| |||||||| Sbjct 349605 CAAAAGGAGTCCACACTCCATCTTGT 349630 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||||||||| || || ||||| ||||| | || |||||| ||| || Sbjct 349653 CAGATTTTTGTGAAAACTCTTACTGGCAAAACCATCACTTTAGAAGTGGAACCCTCTGAT 349712 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||||||||| || ||| || || || || || |||||||| || || ||||| || Sbjct 349713 ACCATCGAGAATGTTAAAGCTAAAATACAAGATAAGGAAGGAATTCCCCCAGACCAACAG 349772 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || || | |||||||| | |||||| | || || || || Sbjct 349773 AGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCTGACTACAATATC 349832 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || || || |||||| | || |||||| Sbjct 349833 CAGAAAGAATCTACTCTCCACCTTGTTCTTAGGCTCAGA 349871 Score = 131 bits (144), Expect = 4e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||||||||| |||||||| || |||||| | || || || || || Sbjct 348741 CAGATTTTTGTGAAAACTCTAACAGGAAAGACCATCACCTTGGAAGTTGAGCCATCTGAT 348800 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||| |||||||| |||||||| || ||||| || ||||| Sbjct 348801 ACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGTATTCCTCCAGATCAGCAG 348860 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 | || ||||| || || ||||| | |||||||| | || |||| | || ||||| | Sbjct 348861 AGGCTAATCTTTGCAGGTAAACAATTAGAAGATGGCCGAAC-CTTGTCTGACTATAATAT 348919 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||||||||| || || || | |||||| Sbjct 348920 TCAAAAAGAATCCACTCTTCACTTAGTTTTG 348950 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || || || || |||||| | || || || || ||| Sbjct 350109 CAGATCTTTGTTAAGACTCTTACTGGCAAGACCATCACCTTGGAAGTTGAGCCATCTGAC 350168 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || ||| |||||||| |||||||||||||| || || || ||||| Sbjct 350169 ACCATCGAAAATGTAAAAGCCAAGATTCAAGACAAAGAAGGAATTCCACCAGATCAGCAG 350228 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || ||||| |||||||| | || || | || |||||| | Sbjct 350229 AGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACGCTCTCTGACTATAACATT 350288 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 |||||||| ||||| || ||| | ||| || |||| Sbjct 350289 CAAAAAGAGTCAACTCTCCATTTAGTTCTGCGACT 350323 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||||||||| || || |||||| | || || || || || Sbjct 348513 CAGATCTTTGTAAAGACTCTCACAGGCAAGACCATCACCTTGGAAGTTGAGCCGTCTGAT 348572 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || |||||||| |||||||||||||| || ||||| || Sbjct 348573 ACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAAGGAATCCCCCCAGACCAACAG 348632 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | ||||| || || || || | |||||||| | |||||| | || ||||| || Sbjct 348633 AGGTTGATCTTTGCTGGTAAGCAATTGGAAGATGGCCGTACTCTTTCAGACTATAATATC 348692 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||||| || || || |||||||| | |||||||| Sbjct 348693 CAGAAAGAGTCTACTCTCCATCTTGTCCTTCGACTCAGA 348731 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||||| || || || || || || || ||||||||| ||| ||| Sbjct 349197 CAAATTTTTGTTAAGACTCTTACTGGCAAGACTATTACTCTTGAGGTGGAACCCTCTGAC 349256 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || || || || ||||| ||||| || || || || |||||| Sbjct 349257 ACTATTGAAAATGTTAAGGCTAAAATCCAAGACAAGGAAGGGATTCCCCCTGATCAGCAA 349316 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || || || || || ||| | || ||||| | || | | || ||||| | Sbjct 349317 CGATTAATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACATTATCTGACTATAATATT 349376 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| ||||| || ||||||||||| Sbjct 349377 CAAAAGGAATCTACTCTGCATCTTGT 349402 >seq6499 Length=11414 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||||||||||||||| || |||||| | || || || || || Sbjct 896 CAGATCTTTGTCAAAACTCTCACAGGAAAGACCATCACCTTAGAAGTCGAGCCATCTGAT 837 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| |||||||||||| |||||||| || ||||| || ||||| Sbjct 836 ACGATTGAAAATGTGAAAGCAAAGATTCAGGATAAAGAAGGTATTCCTCCAGATCAGCAG 777 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || ||||| || ||||| ||| | ||||| || | ||||| | || |||||| | Sbjct 776 AGGCTGATCTTTGCTGGAAAGCAGTTAGAAGACGGCCGTACTCTCTCTGACTATAACATT 717 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || ||||||||||| || || |||||| Sbjct 716 CAGAAAGAATCAACTCTTCACCTTGTT 690 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || |||||||| ||||| ||||| | || |||||| ||| || Sbjct 1124 CAGATTTTTGTGAAGACACTCACAGGTAAAACCATCACTTTAGAAGTGGAACCCTCTGAT 1065 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||| ||||| || || ||||||||||| || || || Sbjct 1064 ACCATTGAAAATGTTAAAGCTAAGATACAGGATAAGGAGGGAATCCCTCCAGATCAACAG 1005 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||| | |||||||| | |||||| | || ||||| || Sbjct 1004 AGATTGATCTTCGCTGGTAAACAATTGGAAGATGGTCGTACTCTTTCAGACTATAATATC 945 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||||| || || || ||||| || | | |||||| Sbjct 944 CAGAAAGAGTCTACTCTCCATCTAGTCCTTCGCCTCAGA 906 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || ||||| || || || || || |||||||| || || || ||||| Sbjct 668 CAAATCTTTGTAAAAACACTTACTGGCAAGACTATCACCCTGGAAGTAGAGCCATCAGAT 609 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || ||||| || |||||||||||||| || || || ||||| Sbjct 608 ACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAGCAG 549 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | |||||||| || || ||||| ||||||||||| ||||| | ||||| ||| | Sbjct 548 AGGTTGATCTTCGCTGGTAAGCAGCTTGAAGATGGAAGAACTCTCTCTGATTACAACATT 489 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || ||||| || ||||| || Sbjct 488 CAAAAGGAGTCAACGCTTCATCTGGT 463 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||||||||| || || || ||| | ||||| || ||||| Sbjct 1352 CAGATCTTTGTTAAGACTCTCACAGGCAAGACCATTACCTTGGAGGTTGAGCCATCAGAT 1293 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| || |||||||| |||||||||||||| || || || || Sbjct 1292 ACTATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATCCCACCAGATCAACAG 1233 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || |||||||| || |||||||| ||||| | || || ||| | Sbjct 1232 AGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAACATA 1173 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || ||||| |||||||| Sbjct 1172 CAAAAGGAGTCCACACTCCATCTTGT 1147 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || || || || ||| | || || || || ||| Sbjct 212 CAGATCTTTGTAAAAACACTTACTGGCAAGACTATTACCTTGGAAGTAGAGCCTTCTGAC 153 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || ||||| || ||||||||||||||||| || || ||||| Sbjct 152 ACTATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCACCAGATCAGCAG 93 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || |||||||| || |||||||| ||||| | || || ||| | Sbjct 92 AGGTTGATTTTTGCAGGTAAACAGCTTGAGGATGGAAGAACTCTCTCAGACTACAACATA 33 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || ||||| |||||||| Sbjct 32 CAAAAGGAGTCCACACTCCATCTTGT 7 >seq1688 Length=171348 Score = 125 bits (138), Expect = 2e-23 Identities = 140/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| ||||| || || || || ||||| ||||| || |||||| Sbjct 124494 CAGATTTTTGTCAAAACCCTCACGGGTAAGACTATTACCCTTGAGGTAGAGCCTTCAGAC 124553 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||||||||| || |||||||| ||||| |||||||| Sbjct 124554 ACCATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCTGACCAGCAG 124613 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | | || || || || ||||| | ||||||||||| ||||| | || ||||| | Sbjct 124614 AGGTTAATTTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTATCTGACTATAATATT 124673 Query 178104 CAAAAAG 178110 || |||| Sbjct 124674 CAGAAAG 124680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203465588435068