Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 324 1e-83
>seq1159
Length=103958
Score = 324 bits (358), Expect = 1e-83
Identities = 614/893 (69%), Gaps = 12/893 (1%)
Strand=Plus/Plus
Query 16658 TGAACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCC 16717
||| ||||||| | ||||||| || | ||| ||| || || || ||||| ||
Sbjct 49817 TGAGCAACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCA 49876
Query 16718 TCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGT 16775
|| ||||||| | ||| |||||||| |||||||| | || | | ||||| |
Sbjct 49877 TCATCAGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATA-ATTTTTCACA 49935
Query 16776 ACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGC 16835
||| ||||| | | ||| | ||| || ||||| || || || || ||||||| | ||
Sbjct 49936 ACCA-AGTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGC 49994
Query 16836 AGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAA 16895
| ||||| || || | || ||||||||||| || || |||||| || || || |||
Sbjct 49995 AATTCATCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAA 50054
Query 16896 CCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAA 16955
|||| || ||||||||| | | ||||||| ||||| | || |||||| | |||
Sbjct 50055 CCGCATCGCGAATAATACTCGTTATACGTTCCTTTGACGGCTTTTGAATAAGATATGTAA 50114
Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015
||| | ||| || || ||| ||||||| || || || | || | ||| |||||||
Sbjct 50115 ACAATAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAA 50174
Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075
| || || |||||||| || || || || |||||||| || || || || || |
Sbjct 50175 ACGTTAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCG 50234
Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135
||||||| |||||||| |||| ||||| || | ||| ||||| | | ||||||| ||
Sbjct 50235 AAAAGAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTT 50294
Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195
| ||| |||||| || |||| || ||||| | || | ||| | |||||| |
Sbjct 50295 TACTACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGA 50354
Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGC 17255
|||| |||||||| ||||||| | | | || ||||| || || || | | ||
Sbjct 50355 TGGCGTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGC 50414
Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315
|||||||||| ||||| || || || || || || ||||| |||||||| || || ||||
Sbjct 50415 TGTACATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTT 50474
Query 17316 CCGCTATTTGAACTTC--CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTC 17373
||| || |||||||| || || || ||||| ||| ||||||||| || || || ||
Sbjct 50475 CCGTTACCTGAACTTCTTGAC-TA-AAACGTTCAACTAAATTTTCGTTTACAATTCCATC 50532
Query 17374 GCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGT--CCGGTGTAAGA 17431
|| || ||||| || || | ||| || |||| ||||| |||| |||
Sbjct 50533 AGAAGCAGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGT-TAA-T 50590
Query 17432 ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491
|||| | || | |||||| || | ||| |||||||| | ||||||||| |||
Sbjct 50591 GTTTGCCAATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCT 50650
Query 17492 ACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAAC 17544
| |||| ||| || | |||||||||| || | ||||| || || ||
Sbjct 50651 TCCGCCTGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGAC 50703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517499816622360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |