Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 315 7e-81
>seq1159
Length=103958
Score = 315 bits (348), Expect = 7e-81
Identities = 608/890 (68%), Gaps = 8/890 (1%)
Strand=Plus/Plus
Query 15898 AGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTC 15957
||||||||| | ||||||| || | ||| ||| || ||||| ||||| || ||
Sbjct 49819 AGCAACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATC 49878
Query 15958 TAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTAC 16015
||||||| | |||||||||||| |||||||| | || | | || || | ||
Sbjct 49879 ATCAGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATA-ATTTTTCACAAC 49937
Query 16016 CCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAA 16075
| ||||| || | ||| | ||| || ||||| || || || || ||||||| | ||||
Sbjct 49938 CA-AGTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAA 49996
Query 16076 TTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACC 16135
|| || || || | | ||||||||||| | |||||||||| ||||| || |||||
Sbjct 49997 TTCATCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACC 50056
Query 16136 GCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAAC 16195
|| || ||| ||| || ||| | ||||| | || | || | | |||||
Sbjct 50057 GCATCGCGAATAATACTCGTTATACGTTCCTTTGACGGCTTTTGAATAAGATATGTAAAC 50116
Query 16196 ATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAA 16255
| || ||| || || ||| |||||| ||||| || | || | ||| || |||||
Sbjct 50117 AATAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAAC 50176
Query 16256 GTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA 16315
||||| || |||||| || || || || ||||| || || || ||||| ||||||
Sbjct 50177 GTTAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAA 50236
Query 16316 AAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTA 16375
||||| ||||||||||| | |||||||| | ||| |||||| | | || || | ||||
Sbjct 50237 AAGAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTA 50296
Query 16376 TTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATG 16435
||| |||||| || |||| || ||||| | ||| | |||| | |||||| |||
Sbjct 50297 CTACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATG 50356
Query 16436 GCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495
|| ||||| || ||||||| | ||| ||||| || ||||| | | |||
Sbjct 50357 GCGTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTG 50416
Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555
|||||||| ||||| || || || || || || ||||| || || || || || || |||
Sbjct 50417 TACATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCC 50476
Query 16556 GCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCAC 16613
| || || ||||| || ||||| ||||| | | || || || || || || |||
Sbjct 50477 GTTACCTGAACTTCTTGAC-TAAAA-CGTTCAACTAAATTTTCGTTTACAATTCCATCAG 50534
Query 16614 TTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATAT 16673
||||||||||| || || | || || |||| ||||| | || | | |
Sbjct 50535 AAGCAGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTT 50594
Query 16674 GCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTG 16733
|||||| || | |||||| || | ||| |||||||| | |||||||| ||| | |
Sbjct 50595 GCCAATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCG 50654
Query 16734 CCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACG 16783
||| ||| || | |||||||||| || | |||||||| ||||||
Sbjct 50655 CCTGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGACG 50704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511369159003640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |