Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq295 111 1e-19
>seq295
Length=373786
Score = 111 bits (122), Expect = 1e-19
Identities = 388/598 (65%), Gaps = 16/598 (3%)
Strand=Plus/Plus
Query 18548 CGATCGAACAGGAATCGGAACGTTATCTTTATTTGGAATGCAAGCTCGATACAATTTGCG 18607
|||||| |||||| | || || || ||||||||||| ||| || ||| | |
Sbjct 5215 CGATCGTACAGGAGTTGGTACATTTGCTTTATTTGGAGCCCAAATGCGTTACTCCCTTCA 5274
Query 18608 AAATGA---ATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGA 18664
|| | ||||||| | ||||| ||||| || ||||||||| | | || || |||||
Sbjct 5275 CAACAACATATTTCCTTTATTAACAACAAAACGCGTTTTTTGGCGCGGTGTAGTTGAAGA 5334
Query 18665 GTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACA 18724
| |||||||| || | ||| ||| | | ||||| | || ||| || | |
Sbjct 5335 ACTTTTATGGTTCATTAGAGGGAGTACCAACGCTAAAGATTTAGCAAAGAAAAATGTGAA 5394
Query 18725 CATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACA 18784
|| ||| || || | | || ||| | || | | ||| || | | | |
Sbjct 5395 TATTTGGAATCCCAACAGCACCAGGGAATATTTAGACTCAATTGGTTTAACTGATCGTGA 5454
Query 18785 CACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAA 18844
|| || | || || ||||| || || || |||||||||| |||||| ||||||
Sbjct 5455 AGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTGAATATG- 5513
Query 18845 AGACTGTCA-AT-CAAACT-ATT-TAC--AGCAAGGAATCGATCAGCTGCAAACTGTTAT 18898
|| | || || ||| ||| ||| | |||| || ||||| | ||||||
Sbjct 5514 -----GTAATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTAT 5568
Query 18899 AGATACAATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAA 18958
|||| ||||||| || ||| ||| | || ||||| | ||||||| || |
Sbjct 5569 TAATACTATTAAAAATAAACCAACTGATCGAAGGATAATTATGTGTGCTTGGAACCCCAT 5628
Query 18959 GGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAA 19018
|||||||| ||||| | ||||||| ||||| ||| ||| ||||| || || |
Sbjct 5629 TGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTATGTAGCCGA 5688
Query 19019 CGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTT 19078
|| ||| | || || | |||| || | || | ||||||||| ||||| || || ||
Sbjct 5689 AGGAGAACTTTCTTGTTTATTATATCAACGTTCAGCGGATATGGGTCTTGGAGTTCCTTT 5748
Query 19079 CAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAA 19136
|| || || | ||||| | ||||| || || | || |||||||||||| |||||
Sbjct 5749 TAATATCGCCAGTTATGCTTTACTTACTTATATGATTGCTCATGTTACAGGA-TTAAA 5805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399469542405465
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |