Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq295 210 2e-49 >seq295 Length=373786 Score = 210 bits (232), Expect = 2e-49 Identities = 357/516 (69%), Gaps = 6/516 (1%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || |||||||||||||| |||| | | || ||| || || || ||||| || ||||| Sbjct 5796 GTAACATGAGCAATCATATAAGTAAGTAAAGCATAACTGGCGATATTAAAAGGAACTCCA 5737 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | |||||||| ||||| | |||||| | | ||| ||||| | ||| || |||||| Sbjct 5736 AGACCCATATCCGCTGAACGTTGATATAATAAACAAGAAAGTTCTCCTTCGGCTACATAA 5677 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932 |||||| ||| ||||||||| || || |||||||||| || || |||||| Sbjct 5676 AATTGAACTAAACAATGACAAGGAGGTAATGCCATTTTAGGGATATCAATGGGGTTCCAA 5617 Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTT 101992 |||||||| | ||||||| ||| || || || |||| ||||||| ||| | | || Sbjct 5616 GCACACATAATTATCCTTCGATCAGTTGGTTTATTTTTAATAGTATTAATAACATCCATT 5557 Query 101993 AATTGGTCAACTCCTTCTCCTTTATAATC---GCGCCCAACACCTTTATATTCTGCTCCG 102049 ||||| |||| |||| ||||||| | || | ||| |||||| ||||| Sbjct 5556 AATTGATCAATACCTTTATTAGTATAATCAGTGTGCATATTACC---ATATTCAGCTCCA 5500 Query 102050 AAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAA 102109 |||| ||||| ||||| ||||| | |||||| | ||| ||||| || | ||| ||| Sbjct 5499 TAATGTCTCCATTGAAAACCATAAATAGGTCCCAAATCGCCTTCTTCACGATCAGTTAAA 5440 Query 102110 CCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCT 102169 |||| | |||||| || || | | || | || |||||| | ||| | Sbjct 5439 CCAATTGAGTCTAAATATTCCCTGGTGCTGTTGGGATTCCAAATATTCACATTTTTCTTT 5380 Query 102170 GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCT 102229 | || ||||| || ||| ||||| || ||||| || ||||||||||| ||||| Sbjct 5379 GCTAAATCTTTAGCGTTGGTACTCCCTCTAATGAACCATAAAAGTTCTTCAACTACACCG 5320 Query 102230 CTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265 | |||||| || | || || ||||| | |||||| Sbjct 5319 CGCCAAAAAACGCGTTTTGTTGTTAATAAAGGAAAT 5284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361220041745327