Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq295 210 2e-49
>seq295
Length=373786
Score = 210 bits (232), Expect = 2e-49
Identities = 357/516 (69%), Gaps = 6/516 (1%)
Strand=Plus/Minus
Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812
|| |||||||||||||| |||| | | || ||| || || || ||||| || |||||
Sbjct 5796 GTAACATGAGCAATCATATAAGTAAGTAAAGCATAACTGGCGATATTAAAAGGAACTCCA 5737
Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872
| |||||||| ||||| | |||||| | | ||| ||||| | ||| || ||||||
Sbjct 5736 AGACCCATATCCGCTGAACGTTGATATAATAAACAAGAAAGTTCTCCTTCGGCTACATAA 5677
Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932
|||||| ||| ||||||||| || || |||||||||| || || ||||||
Sbjct 5676 AATTGAACTAAACAATGACAAGGAGGTAATGCCATTTTAGGGATATCAATGGGGTTCCAA 5617
Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTT 101992
|||||||| | ||||||| ||| || || || |||| ||||||| ||| | | ||
Sbjct 5616 GCACACATAATTATCCTTCGATCAGTTGGTTTATTTTTAATAGTATTAATAACATCCATT 5557
Query 101993 AATTGGTCAACTCCTTCTCCTTTATAATC---GCGCCCAACACCTTTATATTCTGCTCCG 102049
||||| |||| |||| ||||||| | || | ||| |||||| |||||
Sbjct 5556 AATTGATCAATACCTTTATTAGTATAATCAGTGTGCATATTACC---ATATTCAGCTCCA 5500
Query 102050 AAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAA 102109
|||| ||||| ||||| ||||| | |||||| | ||| ||||| || | ||| |||
Sbjct 5499 TAATGTCTCCATTGAAAACCATAAATAGGTCCCAAATCGCCTTCTTCACGATCAGTTAAA 5440
Query 102110 CCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCT 102169
|||| | |||||| || || | | || | || |||||| | ||| |
Sbjct 5439 CCAATTGAGTCTAAATATTCCCTGGTGCTGTTGGGATTCCAAATATTCACATTTTTCTTT 5380
Query 102170 GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCT 102229
| || ||||| || ||| ||||| || ||||| || ||||||||||| |||||
Sbjct 5379 GCTAAATCTTTAGCGTTGGTACTCCCTCTAATGAACCATAAAAGTTCTTCAACTACACCG 5320
Query 102230 CTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAAT 102265
| |||||| || | || || ||||| | ||||||
Sbjct 5319 CGCCAAAAAACGCGTTTTGTTGTTAATAAAGGAAAT 5284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361220041745327
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |