Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq569 105 6e-18
seq241 96.9 3e-15
>seq569
Length=200630
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| ||| | ||||| | || || |||||||| ||| ||| |||||| |
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || | ||| |||||| || || || ||| | || ||||||
Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|||| | | ||||| || || ||||||||||||||| ||| | |||| |||||
Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
||||| |||||||| || |||||| ||||||| ||
Sbjct 134572 CATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCG 134607
>seq241
Length=949647
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||| || ||| ||||||| ||||| || || || ||||| ||| || || |
Sbjct 165821 AATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATC 165880
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || |||| || ||| ||||| ||||| | || ||||||
Sbjct 165881 CGACACCATAGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCA 165940
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|||| | | |||||||| || |||||| |||||||| ||| | | ||||||||
Sbjct 165941 ACAACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAA 166000
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||| || |||||||| |||||||| |||| || |||| |||| ||
Sbjct 166001 TATCCAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGAGGTGG 166048
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||| || || ||||||| ||||| || ||||| ||||| ||| || || |
Sbjct 166961 AATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATC 167020
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || |||| ||||| ||||| ||||| | || ||||||
Sbjct 167021 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 167080
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|||| | | ||||| || || |||||||| |||||| ||| | | ||||||||
Sbjct 167081 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAA 167140
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||| || |||||||||||||| ||| |||| || |||| |||| ||
Sbjct 167141 TATCCAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGAGGTGG 167188
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||| || || ||||||||||||| || ||||| ||||| ||| || || |
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || |||| ||||| ||||||||||| | || ||||||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|||| || | |||||||| || |||||| | ||||| ||| | | ||||||||
Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || || ||||| || || || ||||||| |||| |||||||
Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGG 166276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428299055618435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |