Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq569 111 1e-19
seq241 100 2e-16
>seq569
Length=200630
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| ||| | ||||| | || || |||||||| ||| ||| |||||| |
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || ||||| |||||| || || || ||| | || ||||||
Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|||| | | ||||| || || |||||| |||||||| ||| | |||| |||||
Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249
|||||||||||||| || |||||| ||||||| ||
Sbjct 134572 CATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCG 134607
>seq241
Length=949647
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || ||| ||||||| ||||| || || || ||||| ||| || || |
Sbjct 165821 AATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACTATTACATTGGAAGTTGAGCCATC 165880
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || || ||| ||||| ||||| | || ||||||
Sbjct 165881 CGACACCATAGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATCCCACCAGATCA 165940
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|||| | | |||||||| || ||||||||||||||| ||| | | ||||||||
Sbjct 165941 ACAACGTTTGATCTTTGCTGGAAAACAATTGGAAGATGGACGTACTCTTTCTGATTACAA 166000
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||| ||||||||||| |||||||| |||| || |||| |||| ||
Sbjct 166001 TATCCAAAAGGAATCAACTCTTCATTTGGTATTGAGATTGAGAGGTGG 166048
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || || ||||||||||||| || ||||| ||||| ||| || || |
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || ||||| ||||||||||| | || ||||||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|||| || | |||||||| || |||||||| ||||| ||| | | ||||||||
Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||| ||||| || || || ||||||| |||| |||||||
Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGG 166276
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
|||||| || || ||||||| ||||| || ||||| ||||| ||| || || |
Sbjct 166961 AATGCAGATTTTTGTCAAAACTTTGACTGGAAAAACTATTACTTTAGAAGTTGAGCCATC 167020
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || ||||| ||||| ||||| | || ||||||
Sbjct 167021 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 167080
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
|||| | | ||||| || || |||||| | |||||| ||| | | ||||||||
Sbjct 167081 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGGCGCACTCTTTCTGATTACAA 167140
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||| ||||||||||||||||| ||| |||| || |||| |||| ||
Sbjct 167141 TATCCAAAAGGAATCTACTCTCCACTTGGTATTGAGATTGAGAGGTGG 167188
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093
||||||||| ||| | |||||||| || || |||||||| ||| ||| |||||| |
Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704
Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153
|| || | | || | || ||||| || || ||||| | || ||||||
Sbjct 167705 TGATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167764
Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213
||| | | || || || || ||||||||||||||| || | | ||||||||
Sbjct 167765 ACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAA 167824
Query 25214 TATTCAAAAGGAATCTACTCTTCA 25237
||| ||||||||||| ||||| ||
Sbjct 167825 TATCCAAAAGGAATCCACTCTGCA 167848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410761368390878
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |