Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq569 147 2e-30
seq1159 138 1e-27
seq241 102 8e-17
seq412 91.5 2e-13
>seq569
Length=200630
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| ||||| || || || |||||||||||| |||| || ||| || |
Sbjct 134392 AATGCAAATTTTCGTGAAAACCCTAACCGGTAAAACCATCACCCTCGAGGTTGAACCCTC 134451
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
||| | | | ||| |||||| |||||| | ||||| ||||| ||||| | || ||
Sbjct 134452 CGATACCATCGAAAATGTCAAGGCAAAAATCCAAGACAAGGAGGGTATCCCACCAGATCA 134511
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| | |||| ||| || ||||| ||||| || | ||||| || |||||||||
Sbjct 134512 ACAACGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGACGCACTCTTTCCGACTACAA 134571
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| || ||||| | ||||| || | ||||||||
Sbjct 134572 CATTCAAAAGGAATCGACGCTTCACTTGGTGTTGCG 134607
>seq1159
Length=103958
Score = 138 bits (152), Expect = 1e-27
Identities = 401/615 (65%), Gaps = 2/615 (0%)
Strand=Plus/Minus
Query 116585 CTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGC 116644
|| || || || || | || ||||| |||| ||||| | || || || || |||
Sbjct 50727 CTTCGTGATAATCCAAGACGTTTCGTCGTTTTTCCCATTGAGTATCCTGATATTTGGGCG 50668
Query 116645 ATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGA- 116703
| |||||| |||| || || || || |||||| || || || || || || || ||
Sbjct 50667 AAATACAAACAGGCGGAAGCTTCATTTTGGACCACTGAAGAAGTAGATCTTTCGAAAGAT 50608
Query 116704 CACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763
| | | | | ||| | || | ||| ||||| || ||||| ||| || || | ||
Sbjct 50607 CTCAATC-ATTGGCAAACATTAACCGATAACGAACGTCATTTTATCTCCCATGTTTTAGC 50549
Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGA 116823
|||||| || || || || || || ||||| ||| | || || ||||| ||| ||
Sbjct 50548 CTTTTTTGCTGCTTCTGATGGAATTGTAAACGAAAATTTAGTTGAACGTTTTAGTCAAGA 50489
Query 116824 GGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCA 116883
|| ||||| | || || || || || ||||| ||||| || || || || || | ||
Sbjct 50488 AGTTCAGGTAACGGAAGCACGTTGTTTTTACGGTTTTCAAATTGCTATTGAAAATATTCA 50429
Query 116884 CTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCG 116943
||| |||||||| | | || || || || | | | | | ||
Sbjct 50428 CTCTGAAATGTACAGCATGTTAATTGAAACTTATATTTCTGATCCAAAACAAAAAGAATT 50369
Query 116944 TTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003
||| || ||||||||||| ||| | || || || ||| |||| || || ||||| |
Sbjct 50368 TTTATTTAACGCCATCGAAACGCTTCCTTGTGTTAAAAAGAAAGCTGATTGGGCTTTAAA 50309
Query 117004 CTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063
||||| | | | | || | || || || || | || || || |||||||| ||
Sbjct 50308 TTGGATTAGTAGTAAAAACGCGACTTTTGGGGAACGTTTAGTTGCTTTTGCGGCCGTTGA 50249
Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123
||| | ||||||||||| ||||| || || || |||||| | || || || || | ||
Sbjct 50248 GGGTATTTTCTTTTCGGGAAGTTTTGCAGCTATTTTTTGGTTGAAAAAGCGGGGTTTAAT 50189
Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTT 117183
|||||| | || || || || | || || | || || ||| | |||| ||| ||
Sbjct 50188 GCCCGGTTTAACGTTTTCTAATGAATTAATTTCGCGCGATGAAGGTTTACATTACGAATT 50129
Query 117184 TGCCTGTTTGCTGTT 117198
||| ||||| ||||
Sbjct 50128 TGCTTGTTTATTGTT 50114
>seq241
Length=949647
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
||||| || ||||| ||||| | || || ||||||||||| | || |||| ||||| |
Sbjct 165594 ATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCG-AGCCATC 165652
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| ||||| | ||||||||||| ||||| | |||||
Sbjct 165653 TGACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCA 165712
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| | |||| || || ||||| | || || | || ||||| ||| |||||
Sbjct 165713 ACAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAA 165772
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| ||||| | || || || | || ||| | |||||||| ||
Sbjct 165773 TATCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGG 165820
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || | || || ||||||||||| | || |||||| | |
Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
||||| | | ||| | || | || || | || || || || ||||| | || ||
Sbjct 166337 CGACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCA 166396
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| | |||| || || ||||| | || || | |||||| || || |||||
Sbjct 166397 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAA 166456
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||| || |||| || ||| |||| ||| | ||||| || ||
Sbjct 166457 CATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGG 166504
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || || || | || || ||||||||||| | || |||||| | |
Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|| | || ||||| | || | ||||| | || ||||| || ||||| | ||||
Sbjct 166565 TGATACTATTGAAAACG-TTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACC 166623
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| ||||| | |||| ||| || ||||| || || || | || || || || || |
Sbjct 166624 AACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATA 166683
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||| || || |||| || ||| |||||||| | ||| | || ||
Sbjct 166684 ACATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGG 166732
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||||||||| | || || |||||||||||| | || || ||| | |
Sbjct 167645 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCTTAGAAGTGGAACCTTC 167704
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| | || | ||||| | ||||| || || ||||| | || ||
Sbjct 167705 TGATACTATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167764
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | || | ||| || ||||| |||| || | || ||||| || |||||
Sbjct 167765 ACAGCGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGACGTACCCTTTCAGATTACAA 167824
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||| ||||| |||| |||||| ||||
Sbjct 167825 TATCCAAAAGGAATCCACTCTGCATTTAGT 167854
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||||||||| | || || |||||||||||| | || || ||| | |
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | ||| | || | ||||| | ||||| || || ||||| | || ||
Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| | |||| ||| || ||||| | || || | || || || || |||||
Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||| || || || | || || ||| |||| ||| | || || || ||
Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGG 167644
>seq412
Length=275653
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
||| ||||| || || || ||||| | || ||||| ||||| || | || ||||| |
Sbjct 82785 AAATATGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCC 82844
Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||| | | | ||| |||||| || || | ||||||||||| ||||| ||||
Sbjct 82845 TTCCGATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGA 82904
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|| || || | || | |||||| ||||| || || || | |||||| || || ||
Sbjct 82905 TCAACAGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTA 82964
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| || ||||| || | ||| ||||| ||||
Sbjct 82965 TAATATTCAGAAAGAATCAACGTTGCATTTAGT 82997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515173622421520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |