Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq295 244 7e-60
>seq295
Length=373786
Score = 244 bits (270), Expect = 7e-60
Identities = 366/516 (71%), Gaps = 8/516 (2%)
Strand=Plus/Minus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
|| ||||| || |||||| |||| | || || ||| || || || |||||||| || ||
Sbjct 5796 GTAACATGAGCAATCATATAAGTAAGTAAAGCATAACTGGCGATATTAAAAGGAACTCCA 5737
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
|| |||||||| ||||| | ||||||||| ||| ||||| | ||| || ||||||
Sbjct 5736 AGACCCATATCCGCTGAACGTTGATATAATAAACAAGAAAGTTCTCCTTCGGCTACATAA 5677
Query 97237 AACTGA-CTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295
|| ||| || || | |||||| || || || |||||||| || | ||| | | |||||
Sbjct 5676 AATTGAACTAAACA-ATGACAAGGAGGTAATGCCATTTTAGGGATATCAATGGGGTTCCA 5618
Query 97296 AGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTT 97355
||||||||| | || |||| ||| ||||| || | | || |||||||| | | | |
Sbjct 5617 AGCACACATAATTATCCTTCGATCAGTTGGTTTATTTTTAATAGTATTAATAACATCCAT 5558
Query 97356 TAATTGATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCTTGATATTCTGCTCC 97412
||||||||||| |||| | ||||| ||||| || ||| |||||| |||||
Sbjct 5557 TAATTGATCAATACCTTTATTAGTATAATCAGTGTGCATATTACC---ATATTCAGCTCC 5501
Query 97413 AAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA 97472
| |||| |||||||| || ||||||| |||||| | || |||||||| | |||| ||
Sbjct 5500 ATAATGTCTCCATTGAAAACCATAAATAGGTCCCAAATCGCCTTCTTCACGATCAGTTAA 5441
Query 97473 ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGC 97532
||||| |||||||| ||| | | || | || |||||| | ||||
Sbjct 5440 ACCAATTGAGTCTAAATATTCCCTGGTGCTGTTGGGATTCCAAATATTCACATTTTTCTT 5381
Query 97533 TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACC 97592
||| | ||||| || ||| ||||| || ||||| || | |||||| || |||||
Sbjct 5380 TGCTAAATCTTTAGCGTTGGTACTCCCTCTAATGAACCATAAAAGTTCTTCAACTACACC 5321
Query 97593 TCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628
| |||||| || | || |||||||| | ||||||
Sbjct 5320 GCGCCAAAAAACGCGTTTTGTTGTTAATAAAGGAAA 5285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346754089554890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |