Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq295 244 7e-60 >seq295 Length=373786 Score = 244 bits (270), Expect = 7e-60 Identities = 366/516 (71%), Gaps = 8/516 (2%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || ||||| || |||||| |||| | || || ||| || || || |||||||| || || Sbjct 5796 GTAACATGAGCAATCATATAAGTAAGTAAAGCATAACTGGCGATATTAAAAGGAACTCCA 5737 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || |||||||| ||||| | ||||||||| ||| ||||| | ||| || |||||| Sbjct 5736 AGACCCATATCCGCTGAACGTTGATATAATAAACAAGAAAGTTCTCCTTCGGCTACATAA 5677 Query 97237 AACTGA-CTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295 || ||| || || | |||||| || || || |||||||| || | ||| | | ||||| Sbjct 5676 AATTGAACTAAACA-ATGACAAGGAGGTAATGCCATTTTAGGGATATCAATGGGGTTCCA 5618 Query 97296 AGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTT 97355 ||||||||| | || |||| ||| ||||| || | | || |||||||| | | | | Sbjct 5617 AGCACACATAATTATCCTTCGATCAGTTGGTTTATTTTTAATAGTATTAATAACATCCAT 5558 Query 97356 TAATTGATCAACGCCTTCTCCACCATAAT---TGTGCTTAAGACCTTGATATTCTGCTCC 97412 ||||||||||| |||| | ||||| ||||| || ||| |||||| ||||| Sbjct 5557 TAATTGATCAATACCTTTATTAGTATAATCAGTGTGCATATTACC---ATATTCAGCTCC 5501 Query 97413 AAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA 97472 | |||| |||||||| || ||||||| |||||| | || |||||||| | |||| || Sbjct 5500 ATAATGTCTCCATTGAAAACCATAAATAGGTCCCAAATCGCCTTCTTCACGATCAGTTAA 5441 Query 97473 ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGC 97532 ||||| |||||||| ||| | | || | || |||||| | |||| Sbjct 5440 ACCAATTGAGTCTAAATATTCCCTGGTGCTGTTGGGATTCCAAATATTCACATTTTTCTT 5381 Query 97533 TGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACC 97592 ||| | ||||| || ||| ||||| || ||||| || | |||||| || ||||| Sbjct 5380 TGCTAAATCTTTAGCGTTGGTACTCCCTCTAATGAACCATAAAAGTTCTTCAACTACACC 5321 Query 97593 TCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | |||||| || | || |||||||| | |||||| Sbjct 5320 GCGCCAAAAAACGCGTTTTGTTGTTAATAAAGGAAA 5285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346754089554890