Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq295 210 3e-49
seq241 141 1e-28
seq412 113 7e-20
>seq295
Length=373786
Score = 210 bits (232), Expect = 3e-49
Identities = 378/546 (69%), Gaps = 15/546 (3%)
Strand=Plus/Minus
Query 205419 AATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATA 205478
||||||| |||| ||||| || | ||| |||||||||||||| | |||| |||
Sbjct 5819 AATAAAT--ATATACCTTTAATCCTGTAACATGAGCAATCATATAAGTAAGTAAAGCATA 5762
Query 205479 ACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACA 205538
||| || | |||||| || || || | ||||||||| ||||| | |||||| | | |||
Sbjct 5761 ACTGGCGATATTAAAAGGAACTCCAAGACCCATATCCGCTGAACGTTGATATAATAAACA 5702
Query 205539 TGTAAGATATTTATTATTAAT-TACATGAAATTGTACAAAACAATGACAAGGTGGTATAA 205597
| ||| || | || ||||| |||||| || |||||||||||||| ||||
Sbjct 5701 AGAAAG----TTCTCCTTCGGCTACATAAAATTGAACTAAACAATGACAAGGAGGTAATG 5646
Query 205598 CCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAG--- 205654
|||| || | ||| || || ||||| || | ||||| ||| | ||||
Sbjct 5645 CCATTTTAGGGATATCAATGGGGTTCCAAGCACACATAATTATCCTTCGA---TCAGTTG 5589
Query 205655 GtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAAT 205714
|||||||||| || |||| |||| || |||||||||||| |||| ||| |||||||
Sbjct 5588 GTTTATTTTTAATAGTATTAATAACATCCATTAATTGATCAATACCTTTATTAGTATAAT 5529
Query 205715 TTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGAC 205774
|| | ||||| | ||||| ||| ||| |||| | ||||||||||||||||| || |
Sbjct 5528 CAGTGTGCATATTACCATATTCAGCTCCATAATGTCTCCATTGAAAACCATAAATAGGTC 5469
Query 205775 CTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccat 205834
| ||||| ||||||| | |||| | |||||| | | || ||||| | | |
Sbjct 5468 CCAAATCGCCTTCTTCACGATCAGTTAAACCAATTGAGTCTAAATATTCCCTGGTGCTGT 5409
Query 205835 tttcatcccaaatatggattcctttattttttaGAATATTT-GTATTAGTTGATCCAGAT 205893
| || |||||||| | ||| ||| || ||| ||| | || || ||
Sbjct 5408 TGGGATTCCAAATATTCACATTTTTCTTTGCTA-AATCTTTAGCGTTGGTACTCCCTCTA 5350
Query 205894 ATAAACCATAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAAT 205953
|| |||||||| | ||||||||| | || | |||||| | ||||||||| |||||
Sbjct 5349 ATGAACCATAAAAGTTCTTCAACTACACCGCGCCAAAAAACGCGTTTTGTTGTTAATAAA 5290
Query 205954 GGAAAT 205959
||||||
Sbjct 5289 GGAAAT 5284
>seq241
Length=949647
Score = 141 bits (156), Expect = 1e-28
Identities = 181/248 (73%), Gaps = 1/248 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || |||| ||| |||| || ||||| || || |||| | ||| |
Sbjct 167417 AATGCAAATCTTCGTAAAAACATTAACTGGAAAAACCATCACCCTAGAAGTGGAACCTTC 167476
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||| ||| ||| | ||| ||||| ||||| || ||||| || ||||| |||||
Sbjct 167477 TGATACCATTGAAAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167536
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | || || || || ||||||||||| ||| |||| || | ||||| ||
Sbjct 167537 ACAACGTTTAATCTTCGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAA 167596
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776
||||||||||||||||| | ||||| || || | ||| ||||||| || ||| ||
Sbjct 167597 CATTCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGAATGCAAATCTT 167656
Query 124777 CATAAAAA 124784
| ||||||
Sbjct 167657 CGTAAAAA 167664
Score = 125 bits (138), Expect = 1e-23
Identities = 171/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| | || ||| | || || |||||||| ||| | || |||| ||
Sbjct 166049 AATGCAGATCTTTGTCAAAACATTGACTGGAAAAACTATTACTTTGGAAGTTGAGCCATC 166108
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||| ||| ||| | ||| ||||| || ||||||||||| || || || |||||
Sbjct 166109 TGATACCATTGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGAATTCCTCCAGATCA 166168
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | || ||||| || ||||||||||| || | || || | ||||| ||
Sbjct 166169 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGACGGACGCACTCTTTCTGATTACAA 166228
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| |||||||||||||| | |||||||| || | || |||| || || ||| ||
Sbjct 166229 CATCCAAAAAGAATCAACCCTCCATTTGGTGTTGAGATTGAGAGGAGGAATGCAAATTT 166287
Score = 120 bits (132), Expect = 5e-22
Identities = 176/248 (71%), Gaps = 1/248 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| | || || | || || |||||||| || | || |||| ||
Sbjct 167189 AATGCAGATCTTTGTCAAAACTTTGACTGGAAAAACTATTACATTGGAAGTTGAGCCATC 167248
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||| ||| ||| | ||| ||||| ||||| || ||||| || ||||| |||||
Sbjct 167249 TGATACCATTGAGAATGTTAAAGCTAAAATCCAAGACAAGGAAGGAATCCCACCAGATCA 167308
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | || || || || |||||| | || ||| |||| || | ||||| ||
Sbjct 167309 ACAACGTTTGATCTTCGCCGGTAAACAACTTGAAGATGGTCGTACTCTTTCTGATTACAA 167368
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776
|| |||||||||||||| | ||||| || || | ||| ||||||| || ||| ||
Sbjct 167369 CATCCAAAAAGAATCAACCCTCCATTTAGTATTGAGGTTAAGAGGTGGAATGCAAATCTT 167428
Query 124777 CATAAAAA 124784
| ||||||
Sbjct 167429 CGTAAAAA 167436
Score = 118 bits (130), Expect = 2e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| |||| || ||||| || || | || ||||| | |
Sbjct 166734 ATGCAAATTTTTGTTAAGACCTTAACCGGTAAAACCATCACCTTGGAAGTTGAACCTTCT 166793
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||||| ||| | ||| || || || ||||||||||| || || || ||||||
Sbjct 166794 GATACAATTGAAAATGTTAAAGCTAAGATCCAGGATAAAGAAGGAATTCCTCCAGATCAA 166853
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || ||||| || |||||| | || ||| | || || | || || ||
Sbjct 166854 CAACGTTTAATCTTTGCTGGTAAACAACTTGAAGATGGGCGTACTCTTTCTGACTACAAC 166913
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||||||||||||| | ||||| || || | || ||||||| ||
Sbjct 166914 ATCCAAAAAGAATCAACTCTCCATTTAGTATTGAGATTGAGAGGTGGAAT 166963
Score = 116 bits (128), Expect = 6e-21
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| ||| | ||||| |||| || ||||| || || | || | ||| |
Sbjct 166505 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCTTC 166564
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||| ||| || | ||| ||||| || ||||||||||| || ||||| || ||
Sbjct 166565 TGATACTATTGAAAACGTTAAAGCTAAAATCCAGGATAAAGAAGGGATCCCACCAGACCA 166624
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | || || || || |||||| | || ||| | || || | ||||||||
Sbjct 166625 ACAACGTTTAATCTTCGCCGGTAAACAACTTGAAGATGGACGTACTCTTTCGGATTATAA 166684
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| ||||||||||| || | ||||| || || | || ||||||||||| ||| ||
Sbjct 166685 CATCCAAAAAGAATCCACCCTCCATTTAGTGTTGAGATTGCGAGGTGGTATGCAAATTT 166743
Score = 111 bits (122), Expect = 2e-19
Identities = 112/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| ||||||||||| ||||| || ||||| ||||||||| | | || ||||| ||||||
Sbjct 165906 AAGATTCAAGATAAGGAAGGAATCCCACCAGATCAACAACGTTTGATCTTTGCTGGAAAA 165965
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
||||| || ||| | || || | ||||| ||||| ||||| ||||||||| | |||
Sbjct 165966 CAATTGGAAGATGGACGTACTCTTTCTGATTACAATATCCAAAAGGAATCAACTCTTCAT 166025
Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || | || ||||||| ||
Sbjct 166026 TTGGTATTGAGATTGAGAGGTGGAAT 166051
Score = 109 bits (120), Expect = 8e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | || || | || || ||||| || || ||||| | || || |
Sbjct 165594 ATGCAGATTTTCGTGAAAACCTTGACTGGTAAAACCATCACGTTAGAGGTCGAGCCATCT 165653
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | || |||||| || || ||||| || || ||||| || |||
Sbjct 165654 GACACTATTGAAAATGTGAAGGCGAAAATCCAGGACAAAGAGGGGATCCCACCAGACCAA 165713
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| || | || ||||| |||||||||||||| ||| | || || | ||||| |||
Sbjct 165714 CAACGGTTGATCTTTGCCGGAAAACAATTAGAAGATGGACGTACCCTTTCCGATTACAAT 165773
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| ||||||||| | || ||||| || | || | ||||| ||
Sbjct 165774 ATCCAAAAGGAATCAACTCTCCACTTGGTATTGAGATTGAGGGGTGGAAT 165823
Score = 107 bits (118), Expect = 3e-18
Identities = 167/239 (70%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| ||| | ||||| |||| || ||||| || || | || | ||| ||
Sbjct 166277 AATGCAAATTTTTGTTAAGACCTTAACTGGTAAAACCATCACATTGGAAGTCGAACCATC 166336
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| || ||| ||| | ||| || || |||||||| ||||| || ||||| |||||
Sbjct 166337 CGACACCATTGAAAATGTTAAAGCTAAGATCCAAGATAAGGAAGGAATCCCACCAGATCA 166396
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | || ||||| || ||||||||||| ||| | || || | ||||| ||
Sbjct 166397 ACAACGATTAATCTTTGCTGGTAAACAATTAGAAGATGGGCGCACTCTTTCTGATTACAA 166456
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| || |||||||| || | ||||| || || | || |||| || || ||| ||
Sbjct 166457 CATCCAGAAAGAATCCACCCTTCATTTAGTATTGAGATTGAGAGGAGGAATGCAAATTT 166515
>seq412
Length=275653
Score = 113 bits (124), Expect = 7e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | || || |||| ||||| || |||||| | ||| | || |
Sbjct 82789 ATGCAGATCTTTGTTAAAACTTTAACTGGCAAGACCATAACTCTTGAGGTCGAGCCTTCC 82848
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || || || ||||| ||||| || || ||||| ||||||
Sbjct 82849 GATACCATCGAAAATGTCAAGGCTAAGATCCAAGACAAAGAGGGAATCCCACCGGATCAA 82908
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | ||||| || ||||||||| | || ||| | || || | |||||||||
Sbjct 82909 CAGCGTTTAATTTTCGCGGGAAAACAACTCGAAGATGGGCGCACTCTTTCTGATTATAAT 82968
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
||||| ||||||||||| |||||||| || || | || || |||||
Sbjct 82969 ATTCAGAAAGAATCAACGTTGCATTTAGTCCTAAGATTGCGTGGTGG 83015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755389170473600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |