Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq569 98.7 1e-15
seq135 98.7 1e-15
seq1159 93.3 5e-14
seq241 93.3 5e-14
seq553 89.7 6e-13
seq3 89.7 6e-13
seq531 87.8 2e-12
seq225 86.0 7e-12
seq893 84.2 3e-11
seq175 84.2 3e-11
seq17 84.2 3e-11
>seq569
Length=200630
Score = 98.7 bits (108), Expect = 1e-15
Identities = 152/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
|||||||||||| || | || ||||||||||| ||||| || | ||||| || |
Sbjct 134608 ACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCC 134549
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || || || ||||||||||| || | || || || || | || | | ||||||
Sbjct 134548 ATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTT 134489
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||||||| |||| | | | || ||| | ||| || |||| |||||
Sbjct 134488 GTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGAT 134429
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|||||| || ||||| || || || || |||||||||
Sbjct 134428 GGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392
>seq135
Length=268754
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||||| ||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 199435 AAAAATTATCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 199376
Query 60117 TCACCACTATACTA 60130
||||||||||||||
Sbjct 199375 TCACCACTATACTA 199362
>seq1159
Length=103958
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 68745 AAAAAGATTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 68686
Query 60117 TCACCACTATACTA 60130
||||||||||||||
Sbjct 68685 TCACCACTATACTA 68672
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 62391 AAAAAAATTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 62332
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 62331 TTACCACTATACTA 62318
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/86 (83%), Gaps = 3/86 (3%)
Strand=Plus/Minus
Query 60045 TTAACGTTTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGAC 60104
|||||||| |||||| |||| | | ||||||||||||| |||||||||||||||
Sbjct 59100 TTAACGTTACAAAAAAAT---CTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGAC 59044
Query 60105 AGGCGGACATACTCACCACTATACTA 60130
|||||| ||||| ||||||||||||
Sbjct 59043 AGGCGGGGATACTGACCACTATACTA 59018
>seq241
Length=949647
Score = 93.3 bits (102), Expect = 5e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||||||||| || | ||| || ||||| | ||| || || || || ||||||||||
Sbjct 166505 TCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 166446
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| ||| | || |||| || |||||||| || || | ||| || || || | ||
Sbjct 166445 AAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGG 166386
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||||| || ||| || ||| | | | | |||||| | ||| ||
Sbjct 166385 GATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGAC 166326
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | ||||||||||| || |||| ||||| ||||| |||||||||
Sbjct 166325 TTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277
Score = 93.3 bits (102), Expect = 5e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||| |||||||| | ||| || ||||| | || || |||||||| ||||||||||
Sbjct 167645 TCCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGA 167586
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || | || |||| || ||||| ||||| || | || || || || | ||
Sbjct 167585 AAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGG 167526
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | |||||||| |||||| ||| | | | | || || | ||||||
Sbjct 167525 GATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGTTCCAC 167466
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | ||||||||||| || |||| || ||||| ||||||||||||
Sbjct 167465 TTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167417
Score = 86.0 bits (94), Expect = 7e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|| ||||||| ||| |||||||| ||||||||||| | || || || | || ||
Sbjct 167854 ACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAAAGGGTACGTCCATCTTCC 167795
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
| || ||||||||||| || | ||||| || || | || | | |||||||| |
Sbjct 167794 AATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGG 167735
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
||||| ||| | | | | || || | |||||| || | |||||||||||
Sbjct 167734 ATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACTTCTAAGGTGATGGTTTTT 167675
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| |||| || ||||| ||||||||||||
Sbjct 167674 CCAGTTAATGTTTTTACGAAGATTTGCATT 167645
>seq553
Length=76951
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 30642 AAAAAAATTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 30701
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 30702 TGACCACTATACTA 30715
>seq3
Length=1687240
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| |||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1139815 AAAAAAATTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1139756
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 1139755 TTACCACTATACTA 1139742
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| | |||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 351247 AAAAAAATACTCCCAGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 351188
Query 60117 TCACCACTATACTACCGAGGATT 60139
| |||||||||||| | |||||
Sbjct 351187 TGACCACTATACTAACTGGGATT 351165
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1149420 AAAAAAAGTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1149361
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 1149360 TTACCACTATACTA 1149347
>seq531
Length=395284
Score = 87.8 bits (96), Expect = 2e-12
Identities = 85/107 (79%), Gaps = 3/107 (3%)
Strand=Plus/Plus
Query 60042 AAATTAACGTTTATG--AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGC 60099
||||||| | ||| ||||| ||||| | | ||||||||||||| ||||||||||
Sbjct 377439 AAATTAAAATGAATGGAAAAAAACATCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGC 377498
Query 60100 GTGACAGGCGGACATACTCACCACTATACTACCGAGGA-TTGAATAT 60145
||||||||||| ||||| |||||||||||| | ||| ||||| ||
Sbjct 377499 GTGACAGGCGGGGATACTGACCACTATACTATCTGGGACTTGAAAAT 377545
>seq225
Length=154944
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60056 GAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||||| | |||| | | ||||||||||||| ||||||||||||||||||||| |||
Sbjct 56423 GAAAAAAATACTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 56364
Query 60116 CTCACCACTATACTA 60130
|| ||||||||||||
Sbjct 56363 CTGACCACTATACTA 56349
>seq893
Length=103898
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 102094 AAAAAAAGTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 102153
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 102154 TTACCACTATACTA 102167
>seq175
Length=389053
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 383610 AAAAAAAGTCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 383551
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 383550 TTACCACTATACTA 383537
>seq17
Length=472010
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| | | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 321713 AAAAAAAATCTCCCAGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 321772
Query 60117 TCACCACTATACTA 60130
| ||||||||||||
Sbjct 321773 TGACCACTATACTA 321786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571767015585560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |