Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq295 271 6e-68
>seq295
Length=373786
Score = 271 bits (300), Expect = 6e-68
Identities = 458/658 (70%), Gaps = 5/658 (1%)
Strand=Plus/Plus
Query 19911 AAAACATTCCGAATATCAATACTTGGAGCAAGTTAATTTTATTTTACACAATGGTGTACA 19970
||||||| || |||||||| || || || | || ||| || || ||||| |
Sbjct 5149 AAAACATGAGGAGTATCAATATTTAGACCACATCCATAAAATTATAACCACAGGTGTTAA 5208
Query 19971 AAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATA-TA 20029
|| | ||||| || ||| ||| || || || |||||||| ||| || || |
Sbjct 5209 AAGGAACGATCGTACAGGAGTTGGTACATTTGCTTTATTTGGAGCCCAAATGCGTTACTC 5268
Query 20030 ACTTGAGAA--ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGT 20087
||| | || | |||||| |||||||| || ||||| || |||||| || || ||
Sbjct 5269 CCTTCACAACAACATATTTCCTTTATTAACAACAAAACGCGTTTTTTGGCGCGGTGTAGT 5328
Query 20088 TGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGG 20147
|||||| | |||||||| |||| ||| || || ||| || | | | | |||
Sbjct 5329 TGAAGAACTTTTATGGTTCATTAGAGGGAGTACCAACGCTAAAGATTTAGCAAAGAAAAA 5388
Query 20148 AGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA- 20206
|| || ||||||| | | | | | | ||| |||| || |||| | ||| ||
Sbjct 5389 TGTGAATATTTGGAATCCCAACAGCACCAGGGAATATTTAGACT-CAATTGGTTTAACTG 5447
Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266
| ||| |||| || |||||||| ||| | ||||| |||||||||||||||| ||||||||
Sbjct 5448 ATCGTGAAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTG 5507
Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326
|||||| | | ||| |||| ||||| | |||| | ||||||||| ||||||
Sbjct 5508 AATATGGTAATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTA 5567
Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386
||||| ||||||| || |||| || |||| || ||| | || || |||||| | |
Sbjct 5568 TTAATACTATTAAAAATAAACCAACTGATCGAAGGATAATTATGTGTGCTTGGAACCCCA 5627
Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446
||| | ||| |||||| || ||||| |||||| || |||||||| || ||
Sbjct 5628 TTGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTATGTAGCCG 5687
Query 20447 ATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTT 20506
| ||| | || ||| | | |||||||| || || |||||||| || || |||||||
Sbjct 5688 AAGGAGAACTTTCTTGTTTATTATATCAACGTTCAGCGGATATGGGTCTTGGAGTTCCTT 5747
Query 20507 TCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564
| ||||| || |||||||| | ||||| ||||||||||| |||||||||| |||||
Sbjct 5748 TTAATATCGCCAGTTATGCTTTACTTACTTATATGATTGCTCATGTTACAGGATTAAA 5805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399149570005765
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |