Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq295 271 6e-68 >seq295 Length=373786 Score = 271 bits (300), Expect = 6e-68 Identities = 458/658 (70%), Gaps = 5/658 (1%) Strand=Plus/Plus Query 19911 AAAACATTCCGAATATCAATACTTGGAGCAAGTTAATTTTATTTTACACAATGGTGTACA 19970 ||||||| || |||||||| || || || | || ||| || || ||||| | Sbjct 5149 AAAACATGAGGAGTATCAATATTTAGACCACATCCATAAAATTATAACCACAGGTGTTAA 5208 Query 19971 AAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATA-TA 20029 || | ||||| || ||| ||| || || || |||||||| ||| || || | Sbjct 5209 AAGGAACGATCGTACAGGAGTTGGTACATTTGCTTTATTTGGAGCCCAAATGCGTTACTC 5268 Query 20030 ACTTGAGAA--ATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGT 20087 ||| | || | |||||| |||||||| || ||||| || |||||| || || || Sbjct 5269 CCTTCACAACAACATATTTCCTTTATTAACAACAAAACGCGTTTTTTGGCGCGGTGTAGT 5328 Query 20088 TGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGG 20147 |||||| | |||||||| |||| ||| || || ||| || | | | | ||| Sbjct 5329 TGAAGAACTTTTATGGTTCATTAGAGGGAGTACCAACGCTAAAGATTTAGCAAAGAAAAA 5388 Query 20148 AGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA- 20206 || || ||||||| | | | | | | ||| |||| || |||| | ||| || Sbjct 5389 TGTGAATATTTGGAATCCCAACAGCACCAGGGAATATTTAGACT-CAATTGGTTTAACTG 5447 Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 | ||| |||| || |||||||| ||| | ||||| |||||||||||||||| |||||||| Sbjct 5448 ATCGTGAAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTG 5507 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||||| | | ||| |||| ||||| | |||| | ||||||||| |||||| Sbjct 5508 AATATGGTAATATGCACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTA 5567 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 ||||| ||||||| || |||| || |||| || ||| | || || |||||| | | Sbjct 5568 TTAATACTATTAAAAATAAACCAACTGATCGAAGGATAATTATGTGTGCTTGGAACCCCA 5627 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 ||| | ||| |||||| || ||||| |||||| || |||||||| || || Sbjct 5628 TTGATATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTATGTAGCCG 5687 Query 20447 ATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTT 20506 | ||| | || ||| | | |||||||| || || |||||||| || || ||||||| Sbjct 5688 AAGGAGAACTTTCTTGTTTATTATATCAACGTTCAGCGGATATGGGTCTTGGAGTTCCTT 5747 Query 20507 TCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 | ||||| || |||||||| | ||||| ||||||||||| |||||||||| ||||| Sbjct 5748 TTAATATCGCCAGTTATGCTTTACTTACTTATATGATTGCTCATGTTACAGGATTAAA 5805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399149570005765