Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq1159 383 2e-101
>seq1159
Length=103958
Score = 383 bits (424), Expect = 2e-101
Identities = 615/879 (70%), Gaps = 6/879 (1%)
Strand=Plus/Plus
Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971
|||||| || || | ||| |||| |||||||| ||||| || || ||||||
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAG 14031
| |||||||||||||||||| ||||| | | | ||| |||||||| ||||| ||
Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950
Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091
||| | ||| |||| |||||||| || || |||||||||| |||||||| || ||||
Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010
Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151
| || |||| || ||||||||||| | ||| || || || ||| |||||
Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070
Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 14211
| |||| ||| ||| || || || | | |||| | |||| | |||||| |||||
Sbjct 50071 ACTCGTTATACGTTCCTTTGACGGCTTTTGAATAAGATATGTAAACAATAAACAAGCAAA 50130
Query 14212 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 14271
|| |||| | || ||||| | ||| | ||| || ||||| ||||| || |||||
Sbjct 50131 TTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGGCAT 50190
Query 14272 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 14331
|| || || ||||| |||||||| || || || || ||| |||||||| || |||||
Sbjct 50191 TAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACCCTC 50250
Query 14332 AACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTT 14391
||| || ||||| || | ||| ||||| ||||| | || ||||| | ||||| ||
Sbjct 50251 AACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCAATT 50310
Query 14392 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATG 14451
| |||||| |||| ||| ||||||| | || | ||||| || || |||||||||
Sbjct 50311 TAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAAAAA 50370
Query 14452 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511
||| || | ||| | | ||||| || || ||||| | | ||| ||||||||||||||
Sbjct 50371 TTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGAGTG 50430
Query 14512 TATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATTGTACC 14569
|| ||||| ||||| || |||||||| |||||||| | ||||| | ||| || ||
Sbjct 50431 AATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACC--TGAACT 50488
Query 14570 TC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14628
|| ||| ||||| | ||| | |||||||| || || || |||||| ||| ||||||||
Sbjct 50489 TCTTGACTAAAA-CGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAA 50547
Query 14629 TGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAA 14688
|| || | | ||||| | | || | || | | | | ||| ||||| |
Sbjct 50548 GGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGAG 50607
Query 14689 ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACAT 14748
||| || |||||||||||||| ||| |||||||| ||| | || | ||| || |
Sbjct 50608 ATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATTT 50667
Query 14749 TACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787
|||| || || ||| || |||||||| || ||
Sbjct 50668 CGCCCAAATATCAGGATACTCAATGGGAAAAACGACGAA 50706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482302930502360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |