Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq241 102 6e-17 seq569 100 2e-16 >seq241 Length=949647 Score = 102 bits (112), Expect = 6e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || ||||||||||||||||||||||| || | | || || |||||| |||||| Sbjct 167620 TGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTGT 167561 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || || |||| | | ||||||||| || | |||||||| || |||| | Sbjct 167560 TTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGGATTT-T 167502 Query 18243 TGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 || || || | | ||| || ||| || || ||| | ||||||| |||| || || Sbjct 167501 AGCTTTAACATTTTCAATGGTATCAGAAGGTTCCACTTCTAGGGTGATGGTTTTTCCAGT 167442 Query 18302 CAATGTTTTTACAAAAATTTGCATT 18326 ||||||||||| || ||||||||| Sbjct 167441 TAATGTTTTTACGAAGATTTGCATT 167417 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | | ||| | ||| | ||||| || |||||||| || |||||||| || | Sbjct 166505 TCCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 166446 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||| |||||||| || ||| |||| | || ||||||||| || Sbjct 166445 AAGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGG 166386 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||||| || | | || || || | | ||| ||||| || ||| Sbjct 166385 GATTCCTTCCTTATCTTGGATCT-TAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGA 166327 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | |||||| |||| || || || || || ||||||||||||||| Sbjct 166326 CTTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | | ||| | |||| || || |||||||||||||| |||||||| || | Sbjct 166277 TCCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGA 166218 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | ||||| |||||||| || ||| |||| | || ||||||||| || Sbjct 166217 AAGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGG 166158 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACC-TGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| ||||| |||| | |||| | | | | ||| || ||| ||||| Sbjct 166157 AATTCCTTCTTTATCCTGGATTT-TAGCTTTAACATTTTCAATGGTATCAGATGGCTCAA 166099 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || || |||| || ||||||||||| ||||| || |||||| Sbjct 166098 CTTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| | ||| | || || |||||||||||||| ||||||||||| | | || | Sbjct 166949 TCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGCCC 166890 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | |||||| || ||| |||| | | ||||||||| || | ||||| || Sbjct 166889 ATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGAATTCCTTCTTT 166830 Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288 ||| || | | || || || | | ||| || ||| || || ||| | ||||| Sbjct 166829 ATCCTGGATCT-TAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACTTCCAAGGTGA 166771 Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || |||| ||||| || || || |||||||||||||| Sbjct 166770 TGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || ||||| | ||| || | || || || ||||| ||||| || ||||| || | Sbjct 167873 TCCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGA 167814 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | ||||||||||||||| || || | || | | |||||||| || Sbjct 167813 AAGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGG 167754 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACC-TGTGCAACAGTGTCACCGGGCTCGG 18276 | |||||||| || |||| | |||| | | | | ||| ||| ||| || || Sbjct 167753 GATTCCTTCCTTGTCTTGGATTT-TAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCA 167695 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | ||||||| |||| || || ||||||||||| || ||||||||| Sbjct 167694 CTTCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167645 >seq569 Length=200630 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || ||||| ||||||||||||||||||| | || | ||||||| Sbjct 134601 ACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCATCTTCC 134542 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | |||||| || || |||| | | ||||||||| || | || ||||| || Sbjct 134541 AGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTGTCTTGG 134482 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 |||| | |||||| | | | | || || ||| || || | ||||||| |||| Sbjct 134481 ATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATGGTTTTA 134422 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| | ||||| || |||||||||||| Sbjct 134421 CCGGTTAGGGTTTTCACGAAAATTTGCATT 134392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379311281224365