Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq295 145 2e-29
>seq295
Length=373786
Score = 145 bits (160), Expect = 2e-29
Identities = 350/520 (67%), Gaps = 16/520 (3%)
Strand=Plus/Plus
Query 35183 TTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCACTACCAAG 35242
|||||| |||||||| | | ||| |||| || ||| |||| | || | || |||
Sbjct 5246 TTTGGAGCCCAAATGCGTTACTCCCTTCACAACAACA-TATTTCCTTTAT---TAACAAC 5301
Query 35243 AAAA----TTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATAC 35298
|||| |||| ||| | || || || |||||||| | |||||||| || || | |||
Sbjct 5302 AAAACGCGTTTTTTGGCGCGGTGTAGTTGAAGAACTTTTATGGTTCATTAGAGGGAGTAC 5361
Query 35299 AGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGA 35358
|||| ||||| || || ||||| || | | || ||||| | || | | ||||
Sbjct 5362 CAACGCTAAAGATTTAGCAAAGAAAAATGTGAATATTTGGAATCCCAACAGCACCAGGGA 5421
Query 35359 ATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGG 35418
|| ||| ||| | || ||| ||| | | ||| || ||||||||||| | || ||
Sbjct 5422 ATATTTAGACTCAATTGGTTTAACTGATCGTGAAGAAGGCGATTTGGGACCTATTTATGG 5481
Query 35419 ATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTC-TTCCGATTATACTGGAA 35477
|| |||||| | |||| ||| |||||||||| || | | | | ||||||||| |
Sbjct 5482 TTTTCAATGGAGACATTATGGAGCTGAATATGGTA-ATATGCACACTGATTATACTAATA 5540
Query 35478 AGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAA 35537
| |||||||||||||| || | | || || | | | | || ||| |||| |||
Sbjct 5541 AAGGTATTGATCAATTAATGGATGTTATTAATACTATTAAAAATAAACCAACTGATCGAA 5600
Query 35538 GGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCC 35597
|||| |||||| || ||||| || || ||| | | ||||| | ||||| || |
Sbjct 5601 GGATAATTATGTGTGCTTGGAACCCCATTGATATCCCTAAAATGGCATTACCTCCTTGTC 5660
Query 35598 ACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCG- 35655
| || | | |||||||||||| || | |||||| | || || || ||||| ||
Sbjct 5661 A-TTGTTTAGTTCAATTTTATGTAGCCGAAGGAGAACTTTCTTGTTTATTATATCAACGT 5719
Query 35656 -AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
|||||| ||| || | || || || || ||||| ||
Sbjct 5720 TCAGCGGATATG--GGTCTTGGAGTTCCTTTTAATATCGC 5757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989494270398535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |