Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq295 145 2e-29 >seq295 Length=373786 Score = 145 bits (160), Expect = 2e-29 Identities = 350/520 (67%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 35183 TTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCACTACCAAG 35242 |||||| |||||||| | | ||| |||| || ||| |||| | || | || ||| Sbjct 5246 TTTGGAGCCCAAATGCGTTACTCCCTTCACAACAACA-TATTTCCTTTAT---TAACAAC 5301 Query 35243 AAAA----TTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATAC 35298 |||| |||| ||| | || || || |||||||| | |||||||| || || | ||| Sbjct 5302 AAAACGCGTTTTTTGGCGCGGTGTAGTTGAAGAACTTTTATGGTTCATTAGAGGGAGTAC 5361 Query 35299 AGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGA 35358 |||| ||||| || || ||||| || | | || ||||| | || | | |||| Sbjct 5362 CAACGCTAAAGATTTAGCAAAGAAAAATGTGAATATTTGGAATCCCAACAGCACCAGGGA 5421 Query 35359 ATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGG 35418 || ||| ||| | || ||| ||| | | ||| || ||||||||||| | || || Sbjct 5422 ATATTTAGACTCAATTGGTTTAACTGATCGTGAAGAAGGCGATTTGGGACCTATTTATGG 5481 Query 35419 ATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTC-TTCCGATTATACTGGAA 35477 || |||||| | |||| ||| |||||||||| || | | | | ||||||||| | Sbjct 5482 TTTTCAATGGAGACATTATGGAGCTGAATATGGTA-ATATGCACACTGATTATACTAATA 5540 Query 35478 AGGGTATTGATCAATTGGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAA 35537 | |||||||||||||| || | | || || | | | | || ||| |||| ||| Sbjct 5541 AAGGTATTGATCAATTAATGGATGTTATTAATACTATTAAAAATAAACCAACTGATCGAA 5600 Query 35538 GGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCC 35597 |||| |||||| || ||||| || || ||| | | ||||| | ||||| || | Sbjct 5601 GGATAATTATGTGTGCTTGGAACCCCATTGATATCCCTAAAATGGCATTACCTCCTTGTC 5660 Query 35598 ACATGACT-GCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCG- 35655 | || | | |||||||||||| || | |||||| | || || || ||||| || Sbjct 5661 A-TTGTTTAGTTCAATTTTATGTAGCCGAAGGAGAACTTTCTTGTTTATTATATCAACGT 5719 Query 35656 -AAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694 |||||| ||| || | || || || || ||||| || Sbjct 5720 TCAGCGGATATG--GGTCTTGGAGTTCCTTTTAATATCGC 5757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989494270398535