Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 605 4e-168
seq1159 349 5e-91
>seq1284
Length=72753
Score = 605 bits (670), Expect = 4e-168
Identities = 1260/1871 (67%), Gaps = 43/1871 (2%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
|||||||||||||| | |||||||||||| | || ||| |||||||| ||||| ||
Sbjct 54605 GTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTTAAGT 54546
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | | ||| ||||||||||| || |||| ||| ||| |||| | ||||
Sbjct 54545 CCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGCTACG 54486
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
| | ||| | |||||| |||||||||||||| || || | | || || ||||||
Sbjct 54485 TAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGATTTATG 54426
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078
|| || | || ||||||||||| |||||||||| | || | ||| || || |
Sbjct 54425 ATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCGTCAGG--GA 54368
Query 65079 TTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 65133
|||| | || ||||| || || | || ||| || || ||| || || |||||
Sbjct 54367 TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATTAAATCAT 54308
Query 65134 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 65193
||| | || ||||||||| |||| | | || ||||||| ||||| || || |
Sbjct 54307 CCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCC 54248
Query 65194 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 65253
|||| | |||||| || || |||||||| || || ||||| | ||| || |||||||
Sbjct 54247 CAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTC 54188
Query 65254 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 65313
| | ||||||||| ||||| || || ||||| || || | | |||| |||||| | |
Sbjct 54187 CTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTC 54128
Query 65314 CGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNN 65373
||| | | | ||||| ||||||| || ||||| ||| | ||| || || |||
Sbjct 54127 CGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGAGTAACAT 54068
Query 65374 NNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATG 65433
||| | || || ||||| | || ||| || || || ||
Sbjct 54067 TCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAA 54008
Query 65434 GTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGA 65493
|| || || || |||| ||||||||| || ||||| ||||||||||||| ||||| |
Sbjct 54007 CCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAA 53948
Query 65494 AGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAA 65553
|||| | | |||| | || ||||| |||||||||| || | | | |||||
Sbjct 53947 AGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAA 53888
Query 65554 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTT 65613
| || |||||||||||||||| |||||| || || || | ||| | ||||| || |||
Sbjct 53887 AAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTT 53828
Query 65614 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA---TTTCTGACAA 65670
|||||||||| | || |||||||||| ||| |||| |||||| | | ||| | ||||
Sbjct 53827 CAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAA 53768
Query 65671 TTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA------TCGCTCATCTATTACAA 65724
| | |||| | || | ||| ||||||||| | || | | || |
Sbjct 53767 CTTTTGTGACGA---TTTTTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGA 53711
Query 65725 ACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 65784
|| ||| | |||| ||||| | ||||||||| || | |||| || | | ||||
Sbjct 53710 ACTGGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATT 53651
Query 65785 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 65844
|| || || ||||| | ||| |||| || || || ||||||| |||||| ||||| |
Sbjct 53650 CAATGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTT 53591
Query 65845 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 65904
| ||||| || || ||||| | || ||||||| ||||||||||| ||||| | |
Sbjct 53590 TGCGATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAA 53531
Query 65905 TAATCGCTTTCCAGACGACTCGAGCCTTTATT------ATAGATTTGTATCTCTTTTC-- 65956
| || |||||||| | ||| || |||| | | |||| | || |||||
Sbjct 53530 TTATGGCTTTCCATAATTCTCTGGCGGGTATTTGGCGAACAAATTTTTTCCTTTTTTCGT 53471
Query 65957 -TCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015
||||||||| | | || |||| | || |||||| || || || |
Sbjct 53470 AATTTTCGTATAAT---TCCA------CGAATTTTTCCCCCCAACAATCAGATAAACCGG 53420
Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075
|||||| || |||||||| | ||||||| | || |||| || ||||||||||| |
Sbjct 53419 GACATTGATGAGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATA 53360
Query 66076 GATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135
|||||||||||| | ||| |||||||||||| | ||| ||| || || ||||
Sbjct 53359 AATCAGGAATCCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTAT 53300
Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195
| ||||| | || | || | | || ||| |||||||||||| || || || || |
Sbjct 53299 TTTTTTTTAAATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAA 53240
Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255
||||||| | ||| || || || ||||| | |||| ||| || |||||| |||| |
Sbjct 53239 ACGCTCCAGGTCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCC 53180
Query 66256 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTG 66315
|||||||| | | ||| || || ||||||| || || | ||| | || ||
Sbjct 53179 GTAACATTGGTACTAAACCGTTTGAAATACCATTAGTTCCAGCAATAATCGTGCCTTGTG 53120
Query 66316 CACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATC 66375
| ||||||||| | | || ||||| || || |||| || || | || |||
Sbjct 53119 CTCGAATATTATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATT 53060
Query 66376 GTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAG 66434
|| | || | | | | ||||| | || ||| ||| ||| | | || |||||
Sbjct 53059 GTGAGATACAT-TTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACAT 53001
Query 66435 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 66494
|||||||| | ||| || | || |||||| || ||| ||||| |||||
Sbjct 53000 GACGACATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAAA 52941
Query 66495 CATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 66552
| || ||||| | ||| |||||| || ||||||||||| || || || || | ||||
Sbjct 52940 TACTTCTCAGACATGTA-ATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TGAA 52883
Query 66553 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 66612
| || || || || ||||||||||| || || || | |||| | || || ||| ||||
Sbjct 52882 TCCCAACGGCCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATTT 52823
Query 66613 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 66672
| | | || || ||| | ||||||||||||||||| || ||||| || || || |
Sbjct 52822 TTAGGAGATATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACGAT 52763
Query 66673 CGTAAATAATA 66683
||||||| |||
Sbjct 52762 CGTAAATGATA 52752
>seq1159
Length=103958
Score = 349 bits (386), Expect = 5e-91
Identities = 605/873 (69%), Gaps = 11/873 (1%)
Strand=Plus/Plus
Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925
||||||||| || || || ||| || || |||||||| || || ||||||
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 35926 TTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAAT 35985
| ||| ||||| |||||||| | ||| || | ||||| | | || | ||||| |
Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950
Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045
|| | ||| || ||||| || || || ||| | | |||||||| || || |
Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010
Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105
|||| |||||||| |||| | |||||| |||||||| ||||| || |||||
Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070
Query 36106 A---GATATTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATG 36161
| | ||| || ||| ||| | | | ||||| || | |||||| ||||| |
Sbjct 50071 ACTCGTTAT-AC-GTTCCTTTGACGGCTT--TTGAATAAGATATGTAAACAATAAACAAG 50126
Query 36162 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 36221
| || ||| | |||| ||| || || | ||||||||| || |||||||| | ||||
Sbjct 50127 CAAATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGG 50186
Query 36222 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 36281
|||||| || |||||||| | |||||| || | ||||| ||| ||||||||||| |
Sbjct 50187 GCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATAC 50246
Query 36282 CTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCC 36338
| || || |||||||| |||| | | || ||| || || | | | ||||
Sbjct 50247 CCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCC 50306
Query 36339 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 36398
| ||| ||||||||| || |||||||| |||||||| | || || || || ||||| |
Sbjct 50307 AATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATA 50366
Query 36399 GATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCG 36458
| | | ||||| || ||| || ||| || ||||| || | || |||||||| |
Sbjct 50367 AAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAG 50426
Query 36459 AATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTA 36518
| ||||| |||||||| || |||||||| ||||| ||||| | || || || | ||| |
Sbjct 50427 AGTGAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAA 50486
Query 36519 CTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAA 36578
||||| || ||| ||||| |||||||||| || || ||||| ||| || |||||||
Sbjct 50487 CTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAA 50546
Query 36579 ACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGA 36638
| || || ||||| ||||||| |||||| |||| | | | ||||| |||||
Sbjct 50547 AGGCTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGA 50606
Query 36639 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 36698
|||||| || | ||| |||||||| ||||||||||| || || |||| ||| ||
Sbjct 50607 GATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATT 50666
Query 36699 TATTCCAGATGTCATGATATTGAATTGGAAAAA 36731
| ||| || ||| |||| | ||| |||||||
Sbjct 50667 TCGCCCAAATATCAGGATACTCAATGGGAAAAA 50699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658114576388680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |