Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1284 684 0.0 seq1159 369 5e-97 >seq1284 Length=72753 Score = 684 bits (758), Expect = 0.0 Identities = 1278/1862 (69%), Gaps = 25/1862 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 |||||||||||||| | |||||||||||| | || ||| |||||||| ||||| || Sbjct 54605 GTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTTAAGT 54546 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | | ||| ||||| ||||| || |||| ||| ||| |||| | |||| Sbjct 54545 CCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGCTACG 54486 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 | | ||| | |||||| |||||||||||||| || || | | || || |||||| Sbjct 54485 TAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGATTTATG 54426 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || | || ||||||||||| |||||||||| | || | ||| || || | Sbjct 54425 ATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCGTCAGGGA-- 54368 Query 78958 TTTG-----TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCAT 79012 |||| | || ||||| || || | || ||| || || ||| || || |||| Sbjct 54367 TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATTAAATCAT 54308 Query 79013 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 79072 ||| | || ||||||||| |||| | | || ||||||| ||||| || || | Sbjct 54307 CCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCC 54248 Query 79073 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTC 79132 |||| | |||||| || || |||||||| || || ||||| | ||||| ||||||| Sbjct 54247 CAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTC 54188 Query 79133 CCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 79192 | | ||||||||| ||||| || |||||||| || || | | |||| |||||| | | Sbjct 54187 CTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTC 54128 Query 79193 CGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| | | ||||| ||||||| || ||||||||| | |||||| || ||||| Sbjct 54127 CGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGAGTAACAT 54068 Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAG 79312 |||| | ||| ||||| | || || |||||| | || ||| ||| ||||||||| Sbjct 54067 TCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAA 54008 Query 79313 GTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 || || |||||||||||||||||||| || ||||| || |||||||||| ||||| | Sbjct 54007 CCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAA 53948 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAA 79432 | || | | || | | || ||||| |||||||||| || | | | ||||| Sbjct 53947 AGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAA 53888 Query 79433 ACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTT 79492 | || |||||||||||||||| |||||| || || || | ||| | ||||| || ||| Sbjct 53887 AAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTT 53828 Query 79493 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTA 79552 |||||||||| | || |||||||||| ||| |||| |||||| | ||| | || | Sbjct 53827 CAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAA 53768 Query 79553 CTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGT---CCATC---TATTACAAACA 79606 |||| || |||| ||| ||||||||| | | | || | | || ||| Sbjct 53767 CTTTTGTGACGATTTTTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGAACT 53708 Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTA 79666 ||| | ||| | ||||| | ||||||||| || | |||| || | | |||| | Sbjct 53707 GGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATTCAA 53648 Query 79667 TTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTT 79726 | ||||| ||||| | || |||| || || || ||||||| |||||| ||||| || Sbjct 53647 TGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTTTGC 53588 Query 79727 TGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 79786 ||||| || || ||||| | || | ||||| ||||||||||| ||||| | || | Sbjct 53587 GATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAATTA 53528 Query 79787 TCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTC--TCTTTCGTA 79844 | |||||||| | ||| || ||| | | | | | ||||| | ||||||| Sbjct 53527 TGGCTTTCCATAATTCTCTGGCGGGTAT--TTGGCGAACAAATTTTTTCCTTTTTTCGTA 53470 Query 79845 TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTC 79904 | | |||||| |||| | || |||||| ||| ||| || ||||||| | Sbjct 53469 ATTTTCGTATAATTCCACGAATTTTTCCCCCCAACAATCAGATAAACCGGGACATTGATG 53410 Query 79905 AGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAAT 79964 ||||||||| | ||||||| | ||| |||| || ||||||||||| | ||||||||| Sbjct 53409 AGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATAAATCAGGAAT 53350 Query 79965 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 80024 ||| | ||| ||||| |||||| | ||| || || || ||||| ||||| | Sbjct 53349 CCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTATTTTTTTTTAA 53290 Query 80025 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 80084 || | || | | || ||| | |||||||||||| || || || || | |||| || Sbjct 53289 ATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAAACGCTCCAGG 53230 Query 80085 TCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 80144 || ||| || || || ||||| | |||| ||| || |||||| |||| | |||||||| Sbjct 53229 TCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCCGTAACATTGG 53170 Query 80145 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTG-GCACGAATAT 80203 | | ||| || || ||||||| || || | ||| | | | | || || ||||||| Sbjct 53169 TACTAAACCGTTTGAAATACCATTAGTTCCAGCAATA-ATCGTGCCTTGTGCTCGAATAT 53111 Query 80204 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTA-AC 80262 || | | || ||||| || || |||| || || | || ||| || | || Sbjct 53110 TATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATTGTGAGATAC 53051 Query 80263 GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATT 80322 | | | | ||||| | || ||| || ||| | | || ||||| |||||| Sbjct 53050 AT-TTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACATGACGACATT 52992 Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382 || | ||| || | || |||||| || ||| ||||| ||||| | || ||| Sbjct 52991 TGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAAATACTTCTCA 52932 Query 80383 GACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCG 80440 |||| ||| |||||| || |||||||||||||| || || || | ||||| || || | Sbjct 52931 GACATGTA-ATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TGAATCCCAACGG 52874 Query 80441 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 80500 | || ||||||||||| || || || | |||| | || || || ||||| | | | Sbjct 52873 CCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATTTTTAGGAGAT 52814 Query 80501 AAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 80560 | || ||| | ||||||||||||||||| || ||||| || || || |||||||| | Sbjct 52813 ATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACGATCGTAAATGA 52754 Query 80561 TA 80562 || Sbjct 52753 TA 52752 >seq1159 Length=103958 Score = 369 bits (408), Expect = 5e-97 Identities = 636/916 (69%), Gaps = 12/916 (1%) Strand=Plus/Plus Query 49643 TATCTTCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAAT 49702 |||| ||||||| ||| || ||||||||| || || || ||| || || |||| Sbjct 49809 TATCATCTTGAGC---AACACCAGCTTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAAT 49865 Query 49703 TAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAA 49762 |||| || || |||||| | ||| |||||||| ||||| || ||| || | Sbjct 49866 TAGTACGCCCATCATCAGATATAAGATTCATAAAATCAAATGGATTAGTTGAATTGTATA 49925 Query 49763 tttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCA 49822 ||||| | | || | ||||| | || | ||| || ||||| || || || || Sbjct 49926 ATTTTTCACAACCAAGTTCAGTTAATAAACGATCGGCAACAAACTCAATGTACTGCGACA 49985 Query 49823 TCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTT 49882 | | | |||||||| || || | |||| |||||||| |||| | |||||| |||| Sbjct 49986 TTAAATTGCAATTCATCCCGATTAAACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTT 50045 Query 49883 CAATGGATACCGCATCTGTTATAATAGATC--TAACGGTTTCTTCACTCGGTGGATGCAA 49940 |||| |||||||| |||||| || || ||| ||| ||| || || Sbjct 50046 CAATTTCAACCGCATCGCGAATAATAC-TCGTTATACGTTCCTTTGA-CGGCTTTTG-AA 50102 Query 49941 TAA-ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 49999 ||| || | |||||| ||||| || || ||| | || | ||| || || | ||||| Sbjct 50103 TAAGATATGTAAACAATAAACAAGCAAATTCGTAATGTAAACCTTCATCGCGCGAAATTA 50162 Query 50000 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACG 50059 ||| || |||||||| | |||||||||| || |||||||| | |||||| || | | Sbjct 50163 ATTCATTAGAAAACGTTAAACCGGGCATTAAACCCCGCTTTTTCAACCAAAAAATAGCTG 50222 Query 50060 CAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCAT 50119 |||| || |||||||| || || || || || ||||| ||||| | | || ||| Sbjct 50223 CAAAACTTCCCGAAAAGAAAATACCCTCAACGGCCGCAAAAGCAACTAAACGTTCCCCAA 50282 Query 50120 AACTGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 50176 || | ||| | | | ||||| ||| ||||||||| || |||||||| ||||||| Sbjct 50283 AAGTCGCGTTTTTACTACTAATCCAATTTAAAGCCCAATCAGCTTTCTTTTTAACACAAG 50342 Query 50177 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 50236 | | |||||| ||||| ||||| | | | | ||||| || ||| || |||||| | Sbjct 50343 GAAGCGTTTCGATGGCGTTAAATAAAAATTCTTTTTGTTTTGGATCAGAAATATAAGTTT 50402 Query 50237 CGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGA 50296 | || || | || |||||||| || ||||| |||||||| || || ||||| ||||| | Sbjct 50403 CAATTAACATGCTGTACATTTCAGAGTGAATATTTTCAATAGCAATTTGAAAACCGTAAA 50462 Query 50297 AACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCA 50356 |||| | || || || | ||| |||||| || ||| |||||| |||||||||| || | Sbjct 50463 AACAACGTGCTTCCGTTACCTGAACTTCTTGACTAAAACGTTCAACTAAATTTTCGTTTA 50522 Query 50357 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGG 50416 | ||||| ||| || |||||||| || || ||||| |||||||| |||||| Sbjct 50523 CAATTCCATCAGAAGCAGCAAAAAAGGCTAAAACATGGGAGATAAAATGACGTTCGTTAT 50582 Query 50417 GTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAA 50476 |||| | | | ||||| ||||| |||||| || | |||||||||||| ||||||| Sbjct 50583 CGGTTAATGTTTGCCAATGATTGAGATCTTTCGAAAGATCTACTTCTTCAGTGGTCCAAA 50642 Query 50477 ATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAA 50536 |||| || || |||| ||| || | ||| || ||| |||| | || || |||| | Sbjct 50643 ATGAAGCTTCCGCCTGTTTGTATTTCGCCCAAATATCAGGATACTCAATGGGAAAAACGA 50702 Query 50537 CAAATCTATTTGGATT 50552 | || | ||||||| Sbjct 50703 CGAAACGTCTTGGATT 50718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718205260146280