Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq241 116 3e-21
seq569 89.7 4e-13
seq412 86.0 5e-12
>seq241
Length=949647
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| |||| ||| |||||||| | ||||||||||||
Sbjct 165820 CCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAA 165761
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || || |||||||| |||||||| ||||| || ||||| || | ||
Sbjct 165760 AGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGG 165701
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || ||||| || ||| | | || || | ||| ||||| | ||||||
Sbjct 165700 ATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACC 165641
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| ||| || ||||| || || | |||||||| ||||| |||||
Sbjct 165640 TCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||| || | | || ||||| | |||| |||||||| | ||||||||| ||
Sbjct 167872 CCACCACGTAGGCGAAGAACTAAATGCAGAGTGGATTCCTTTTGGATATTGTAATCTGAA 167813
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || ||||||||||| || || |||||||| ||||||||||| | ||
Sbjct 167812 AGGGTACGTCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGTGGG 167753
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || ||| |||| || | ||| || || || || ||
Sbjct 167752 ATTCCTTCCTTGTCTTGGATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGTTCCACT 167693
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|||| || || |||||||| |||| ||||| || || |||||||||
Sbjct 167692 TCTAAGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCATT 167645
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || |||||||| | ||| |||||||| | ||||||||| ||
Sbjct 166048 CCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAA 165989
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || ||||||||||| || ||||| ||||| || |||||||| | ||
Sbjct 165988 AGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 165929
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || ||| |||| || | | | |||||| | ||| ||
Sbjct 165928 ATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCTATGGTGTCGGATGGCTCAACT 165869
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || ||||| ||||| || | |||||| || || || ||||||
Sbjct 165868 TCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATT 165821
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| | || ||| ||||||||||||| || || ||||| | |||||||| ||
Sbjct 166276 CCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 166217
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || ||| |||| || |||||||| || ||||| || ||||| |||||||| | ||
Sbjct 166216 AGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGA 166157
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || ||| |||| || | ||| || || | ||| ||
Sbjct 166156 ATTCCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACT 166097
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || ||||||||||| || | ||||| ||||| || ||||||
Sbjct 166096 TCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCATT 166049
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || ||||| |||| ||| |||||||| | ||||||||| ||
Sbjct 167188 CCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAA 167129
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || | || || | |||||| ||||| || || || || |||||||| | ||
Sbjct 167128 AGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 167069
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || ||| |||| || | ||| || || | ||| ||
Sbjct 167068 ATTCCTTCCTTATCCTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACT 167009
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|||| || ||||||||||| || | |||||| |||||||| ||||||
Sbjct 167008 TCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCATT 166961
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| | || ||| || || ||||| | ||| || || || | |||||||| ||
Sbjct 166504 CCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAA 166445
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || | || || |||||||| || ||||| || ||||| |||||||| | ||
Sbjct 166444 AGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGG 166385
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||| || || |||| |||| || | ||| |||||| | |||||
Sbjct 166384 ATTCCTTCCTTATCTTGGATCTTAGCTTTAACATTTTCAATGGTGTCGGATGGTTCGACT 166325
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || || ||||| || |||| || || |||||||||||||||
Sbjct 166324 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166277
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || |||| ||| ||||| ||||||| ||| || ||||| | || ||||| ||
Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| |||||| | || || | |||||| ||||| || || || || ||||| || | ||
Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || ||| |||| || | ||| || || || |||||
Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCTTTAACGTTTTCAATAGTATCAGAAGGTTCGACT 166553
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || || ||||| || |||| || || |||||||||||||||
Sbjct 166552 TCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCATT 166505
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || | || ||| || || ||||||| ||| || ||||| | ||||| || ||
Sbjct 166960 CCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAA 166901
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||||| | || || | |||||| || ||||| || || || |||||||| | ||
Sbjct 166900 AGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 166841
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || |||| |||| || | ||| ||| || || || ||
Sbjct 166840 ATTCCTTCTTTATCCTGGATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCAACT 166781
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | || || ||||| ||||||| || || ||||||||||||||
Sbjct 166780 TCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCAT 166734
>seq569
Length=200630
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| ||||| || | |||||||| || | || |||||||| | ||||| |||||
Sbjct 134620 GCCACCACGAAGACGCAACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGA 134561
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| || ||| | || |||| |||||| || || || || || || |||||||| | ||
Sbjct 134560 AAGAGTGCGTCCATCTTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGG 134501
Query 43002 CACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061
| ||| || || || ||| | ||||| | | | || ||| | || ||
Sbjct 134500 GATACCCTCCTTGTCTTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAAC 134441
Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110
|| | || || ||||| |||||||| |||||||| ||||||||||||
Sbjct 134440 CTCGAGGGTGATGGTTTTACCGGTTAGGGTTTTCACGAAAATTTGCATT 134392
>seq412
Length=275653
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| ||||||| ||||| || ||||| | || || || || | ||| ||||| ||
Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || | || || | |||||| || || ||||| || ||||||||||| | ||
Sbjct 82955 AGAGTGCGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGGG 82896
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| || ||||| || |||| | ||||| | | | || ||| || ||||||
Sbjct 82895 ATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGACC 82836
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112
|| | ||||| || || || |||| |||||| ||||| || ||||| ||
Sbjct 82835 TCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCATATT 82786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381336706514466
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