Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1284 571 8e-158
seq1159 372 4e-98
seq104 89.7 7e-13
>seq1284
Length=72753
Score = 571 bits (632), Expect = 8e-158
Identities = 1256/1874 (67%), Gaps = 33/1874 (2%)
Strand=Plus/Minus
Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860
|| || |||||||| | ||||| |||||| | || ||| ||||| |||||||| ||
Sbjct 54605 GTGAATTGAATGGGTTGAGCTGCGGGTTTCGTTCTTAAATAATACATTCCTGTTTTAAGT 54546
Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATG 70920
|| | | ||| ||||||||||| || |||| ||| || | || | ||||| |
Sbjct 54545 CCTTGTCGCCAGCCGTAAAAATGAATTGATGTTAAAACGGAGTAAGTCGGTTTGGCTACG 54486
Query 70921 TGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 70980
| || ||| | || || |||||||||||||| || || | | || || ||||||
Sbjct 54485 TAAAGATTTAAAGATTGGCTTTGATCGATGAAAGCCCCTCGAGCCGCGGCTTGATTTATG 54426
Query 70981 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 71040
|| || | || ||||||||||| |||||||||| | || | ||| || || |
Sbjct 54425 ATGCATTTATTTGAAATTTCCCAAACTGTTTTATAAATTTCTTTTAAATCGTCAGGGA-- 54368
Query 71041 TTTG-----TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCAT 71095
|||| | || ||||| || || | || |||||| || |||||| || ||||
Sbjct 54367 TTTGGGGGATGTTTTGAATTGAGCCGCGATTTGCAATTATTTGATTTTTCATTAAATCAT 54308
Query 71096 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTC 71155
||| | || ||||||||| |||| | | || ||||||| ||||| || || |
Sbjct 54307 CCCAAAGCCCCCTTTCGGTTAAATCTCTTAATAAGTGGTGATTAACAACTTGGAAATCCC 54248
Query 71156 CAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTC 71215
|||| | |||||| || || |||||||| || || ||||| | || || |||||||
Sbjct 54247 CAGAAAGTACTCTTCGCGTATAAATATTCGATGTGTAAGGTTCAAAAGATTCGTTATTTC 54188
Query 71216 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGAC 71275
| | ||||||||| ||||| || || ||||| || || | | || | |||||| | |
Sbjct 54187 CTAGAATTTGAGCTGTTGAAGCTGTTGGCATTGGGGCTAAGAGTAAAGAATTTCTTATTC 54128
Query 71276 CATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNN 71335
| ||| ||||| ||||||| || ||||| ||| | ||| ||||| |||
Sbjct 54127 CGTGTTTATTAATTTTTTCTTTTAATTCTTTCCAATCCCATAAATCAGATGGAGTAACAT 54068
Query 71336 NNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTATG 71395
|| || |||||| | || ||| || || || ||
Sbjct 54067 TCCACATATCGTATTGCAAGATTCCTTTACTAACAGGGGAACCTTGGTAAGTTTCATAAA 54008
Query 71396 GTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGA 71455
|| ||||||||||||| ||||||||| || ||||| || || ||||||| ||||| |
Sbjct 54007 CCCCGTCTTTTTCGGCTAATTCACAACTAGCTTCTAAGGCACCGTAATAAAGCGTTTCAA 53948
Query 71456 AAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAA 71515
| || | | || | | || ||||| ||||||||||| || | | | |||||
Sbjct 53947 AGATTTGCACGTTTAATTTATGGGCTTCGGGGCTATCAAAGGGGAGTCTCATCAAAATAA 53888
Query 71516 ACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTT 71575
| || |||||||||||||||| ||||| || || || | || | ||||| || |||
Sbjct 53887 AAGCATCTGCTAATCCTTGAATACCAATTCCAATGGGGCGATGGCGTTTATTGGACGTTT 53828
Query 71576 CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTA 71635
|||||||||| | || |||||||||| ||| |||| |||||| | |||| | || |
Sbjct 53827 CAGCTTCTGGGAGTGGGTAATAATTAACATCGATAACTTTATTTAAATTTTTTGTTACAA 53768
Query 71636 CTTTGACCACATCCTTTAGTTTGAGAAAATCAAA---TCTCCCATC---TATTACAAACA 71689
|||| || |||| ||| ||||||||| | ||| || | | || |||
Sbjct 53767 CTTTTGTGACGATTTTTAATTTTTCAAAATCAAAACTTTTCCTGTCGGGTTTAACGAACT 53708
Query 71690 CGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTA 71749
||| | |||| ||||| | ||||||||| || | |||| || | | |||| |
Sbjct 53707 GGTTAACCGCAATTGATGCTAAATTACAAACTGCGATTTCATCAGGAGATGTGTATTCAA 53648
Query 71750 TAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTT 71809
| ||||| ||||| | ||| |||| || || || ||||||| |||||| ||||| ||
Sbjct 53647 TGATTTCGGTGCATAAATTGCTACTTTTTATTGTACCTAAATGTTGTTGGTTACTTTTGC 53588
Query 71810 TGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 71869
||||| || || ||||| | ||| | ||||| ||||||||||| ||||| | || |
Sbjct 53587 GATTACAAGCGTCTTTATACAACATATATGGAGTTCCAGTTTCAATTTGAGACACAATTA 53528
Query 71870 TCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTC--TCTTTCGTA 71927
| |||||||| | ||| || ||| | | | | ||||| | |||||||
Sbjct 53527 TGGCTTTCCATAATTCTCTGGCGGGTAT--TTGGCGAACAAATTTTTTCCTTTTTTCGTA 53470
Query 71928 TTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATT 71987
| | |||||| |||| | || |||||| || ||| || ||||||| ||
Sbjct 53469 ATTTTCGTATAATTCCACGAATTTTTCCCCCCAACAATCAGATAAACCGGGACATTGATG 53410
Query 71988 CGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAAT 72047
|||||||| | |||||| | ||| || | || ||||||||||| | |||||||||
Sbjct 53409 AGGACACATTAGCGACCACATTGAATCTTCCTCGACGCGTTTCATAAATAAATCAGGAAT 53350
Query 72048 CCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107
||| | ||| ||||| |||||| | ||| || || || ||||| ||||| |
Sbjct 53349 CCATAAAGCATAAAATAAATCTCTCGCCCTAACTTCTTCAGCCCCAGTATTTTTTTTTAA 53290
Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167
|| | || | | || ||| | |||||||||||| || || || || | |||| ||
Sbjct 53289 ATTTAAAAAATCAACAACATCCGCATGCCACGGTTCTAAATAAATTGCAAACGCTCCAGG 53230
Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227
| ||| || || || ||||| | |||| ||| || |||||| |||| | ||||||||
Sbjct 53229 TCTTTTATTACCCCCTTGATCGACATATCGAGCTGTATTATTAAAAACCCGTAACATTGG 53170
Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTG-GCACGAATAT 72286
| | ||| || || |||||| || || | ||| | | | | || || |||||||
Sbjct 53169 TACTAAACCGTTTGAAATACCATTAGTTCCAGCAATA-ATCGTGCCTTGTGCTCGAATAT 53111
Query 72287 TGCTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 72342
| || || | || ||||| || || |||| || || | || ||| ||
Sbjct 53110 T----ATGGACGTTAACTCCAATTCCTCCCGCACTTTTTGATATAATAGCACATTGTGAG 53055
Query 72343 A-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401
| || | | | | ||||| | || ||| ||| ||| | | || ||||| ||
Sbjct 53054 ATACAT-TTAAAAATGCCTTGGATTGAATCCTCCGGCATCATTACTAAGAAACATGACGA 52996
Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461
|||||| | ||| || | || |||||| || ||| ||||| ||||| | ||
Sbjct 52995 CATTTGTGGGCGAGGTGTCGCTGCGGCAAATAAAGTCGGACTCGCGTGAGTAAAATACTT 52936
Query 72462 TTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCT 72519
||||||| ||| |||||| || |||||||||||||| || || || | || || ||
Sbjct 52935 CTCAGACATGTA-ATTGTAAGTTTCAATAGCTGATTCAATGTCTTCACCG-TGAATCCCA 52878
Query 72520 ACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAAC 72579
|| || || |||||||||||||| || || | |||| | || || || ||||| |
Sbjct 52877 ACGGCCACGCGCATTAACATATGTTGGGGACGTTCAGCAATTTTTCCGTTGATTTTTAGG 52818
Query 72580 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 72639
| || || ||| | ||||||||||||||||| || ||||| || || || ||||||
Sbjct 52817 AGATATGAACGTTCGAGTGTTTTAAAACCAAAATAATTATATGAGAAATCACGATCGTAA 52758
Query 72640 ATAATAACCGAATT 72653
|| ||| |||||
Sbjct 52757 ATGATACAAGAATT 52744
>seq1159
Length=103958
Score = 372 bits (412), Expect = 4e-98
Identities = 618/889 (70%), Gaps = 5/889 (1%)
Strand=Plus/Plus
Query 41773 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATT 41832
||||||||| || || || ||| || || |||||||| || || ||||||
Sbjct 49831 TTTTTGGTACTCCCCAACCTTTTTCTCAAAGAAATTAGTACGCCCATCATCAGATATAAG 49890
Query 41833 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 41892
| ||| |||||||| ||||| || ||| || | ||||| | | || | ||||| |
Sbjct 49891 ATTCATAAAATCAAATGGATTAGTTGAATTGTATAATTTTTCACAACCAAGTTCAGTTAA 49950
Query 41893 CAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 41952
|| | ||| || | || || || || ||| | | |||||||| || || |
Sbjct 49951 TAAACGATCGGCAACAAACTCAATGTACTGCGACATTAAATTGCAATTCATCCCGATTAA 50010
Query 41953 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012
|||| |||||||| |||| | |||||| |||||||| ||||| || |||||
Sbjct 50011 ACTAACCGGAAGAGCATCAGTTAAAAATTCCTGTTCAATTTCAACCGCATCGCGAATAAT 50070
Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAA-ATGTTTAAACATCAAACATGCGA 42071
| ||| ||| | ||| | ||||| || | |||||| ||||| || |
Sbjct 50071 ACTCGTTATACGTTCCTTTGACGGCTTTTG-AATAAGATATGTAAACAATAAACAAGCAA 50129
Query 42072 AATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 42131
| ||| | || | ||| ||||| | ||||||||| || |||||||| | |||||||
Sbjct 50130 ATTCGTAATGTAAACCTTCATCGCGCGAAATTAATTCATTAGAAAACGTTAAACCGGGCA 50189
Query 42132 TTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTT 42191
||| || |||||||| | |||||| |||| ||||| ||| |||||||| || || |
Sbjct 50190 TTAAACCCCGCTTTTTCAACCAAAAAATAGCTGCAAAACTTCCCGAAAAGAAAATACCCT 50249
Query 42192 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACT 42248
| || |||||||| |||| | | || ||| || || | | | ||||| |
Sbjct 50250 CAACGGCCGCAAAAGCAACTAAACGTTCCCCAAAAGTCGCGTTTTTACTACTAATCCAAT 50309
Query 42249 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 42308
|| ||||||||| || |||||||| |||||||| | |||||| ||||| ||||| | |
Sbjct 50310 TTAAAGCCCAATCAGCTTTCTTTTTAACACAAGGAAGCGTTTCGATGGCGTTAAATAAAA 50369
Query 42309 AGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAAT 42368
| | ||||| || ||| || ||| || || || || | || |||||||| || |
Sbjct 50370 ATTCTTTTTGTTTTGGATCAGAAATATAAGTTTCAATTAACATGCTGTACATTTCAGAGT 50429
Query 42369 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT 42428
|||| |||||||| || || ||||| ||||| ||||| | || || || ||||| ||||
Sbjct 50430 GAATATTTTCAATAGCAATTTGAAAACCGTAAAAACAACGTGCTTCCGTTACCTGAACTT 50489
Query 42429 CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACG 42488
|| || ||| |||||| ||||||||||||| || ||||| ||| || |||||||| |
Sbjct 50490 CTTGACTAAAACGTTCAACTAAATTTTCGTTTACAATTCCATCAGAAGCAGCAAAAAAGG 50549
Query 42489 CCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATAT 42548
| || ||||| ||||||| ||||| |||||| | | ||||| ||||| ||
Sbjct 50550 CTAAAACATGGGAGATAAAATGACGTTCGTTATCGGTTAATGTTTGCCAATGATTGAGAT 50609
Query 42549 CTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATAT 42608
|||| || | |||||||||||| ||||||||||| ||||| |||| ||| || |
Sbjct 50610 CTTTCGAAAGATCTACTTCTTCAGTGGTCCAAAATGAAGCTTCCGCCTGTTTGTATTTCG 50669
Query 42609 TCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATT 42657
||| |||||| |||| | ||| || |||| || || | |||||||
Sbjct 50670 CCCAAATATCAGGATACTCAATGGGAAAAACGACGAAACGTCTTGGATT 50718
>seq104
Length=333490
Score = 89.7 bits (98), Expect = 7e-13
Identities = 272/402 (68%), Gaps = 25/402 (6%)
Strand=Plus/Plus
Query 165702 TATGGTAAAGGAGCAAAGGGTGGTATCATGGCAGTCTTTCTAATGGGTTGTTACGA-CGA 165760
||||||| || ||| ||||| || ||| | | |||||||||||||||||||| | |
Sbjct 112952 TATGGTACTGGTAAAAAAGGTGGAATGATGTCGATTTTTCTAATGGGTTGTTACGATCCA 113011
Query 165761 TGAATCCGGTAAATGGAAG-ACGGTAACTAAATGTTCC----GGCCACGATGATAATACG 165815
|||| | || | || || || || |||| || ||||||||||| ||
Sbjct 113012 --AATCGTGATTATTTTTGTACTGTTACCAAG-GTTCATACAGGACACGATGATAAAACA 113068
Query 165816 TTA--AGGGTTTTACAAGACCAATTAAAGATGGTTAAAATTAACAAGGATCCCaaaaaaa 165873
||| | || || ||| | || | | ||| | ||||| | ||| ||| ||||
Sbjct 113069 TTAGAACGGCTT--CAAAATGAACTCGATATGATAAAAATAAGTGGAGATATCAATAAAA 113126
Query 165874 TTCCAGTGTGGTTG-GTAGTTAATAAAATCTAT-ATTCCCGATTTTGTAGTAGAGGATCC 165931
| || ||||| || || | ||| | || || |||||||| |||| | | || ||
Sbjct 113127 TACCTAAATGGTTACGTTGT--ACGAAAACAATGATCCCCGATTTAGTAGCAAAAGACCC 113184
Query 165932 --AAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTTTACGTCTTCA--AAGTCAC 165987
||||| | | | | | ||||||||| | || || || || || || || |||| |
Sbjct 113185 CAAAAACCAAC-CTGTT-TGGGAAATTACGGGCGCGGAATTCAC-TCAACACGAAGTT-C 113240
Query 165988 ATACAGCAAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGAGAAGATAAAA 166047
| || ||||||||||| || ||| | || || || |||| | |||| ||||||| || |
Sbjct 113241 ACACCGCAAATGGAATTTCAATTCGTTTCCCAAGGGTTACAAAGATTCGAGAAGAAAAGA 113300
Query 166048 CGTGGAAAGAATCTACTCATCTAAACGATTTAGTAAACTTGA 166089
| |||||||| | ||| || |||| || |||| ||| ||||
Sbjct 113301 CTTGGAAAGAGGCAACTAATTTAAATGAATTAGAAAAATTGA 113342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671079829348520
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