Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq295 86.0 9e-12 >seq295 Length=373786 Score = 86.0 bits (94), Expect = 9e-12 Identities = 231/349 (66%), Gaps = 6/349 (2%) Strand=Plus/Plus Query 70062 AAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATG 70121 |||| |||||| |||| || | || || || || ||||| || | || | | |||| Sbjct 5454 AAGAAGGCGATTTGGGACCTATTTATGGTTTTCAATGGAGACATTATGGAGCTGAATATG 5513 Query 70122 -TAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGAC 70180 || ||| | || || ||| | | | ||| |||||||||| | | ||| | Sbjct 5514 GTAATATGC-ACACTGATTATACTAATAAAGGTATTGATCAATTAATGGATGTTATTAAT 5572 Query 70181 ACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGAT 70240 ||| | || | || ||||| ||| | ||||| | ||||| | ||||| || ||| Sbjct 5573 ACTATTAAAAATAAACCAACTGATCGAAGGATAATTATGTGTGCTTGGAACCCCATTGAT 5632 Query 70241 TTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTA--CGATG 70298 | | |||||||| |||| || ||||| ||||| | ||| ||||| ||| ||| | Sbjct 5633 ATCCCTAAAATGGCATTACCTCCTTGTCATTGTTTAGTTCAATTTTAT--GTAGCCGAAG 5690 Query 70299 GCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTA 70358 | || | || || ||| | ||||| | || || ||||| || || || || |||| Sbjct 5691 GAGAACTTTCTTGTTTATTATATCAACGTTCAGCGGATATGGGTCTTGGAGTTCCTTTTA 5750 Query 70359 ACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGG 70407 | || || || ||| || | | || | ||||||||||| |||| || Sbjct 5751 ATATCGCCAGTTATGCTTTACTTACTTATATGATTGCTCATGTTACAGG 5799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740993644050520