Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq241 161 7e-35
seq569 125 5e-24
seq62 104 2e-17
>seq241
Length=949647
Score = 161 bits (178), Expect = 7e-35
Identities = 174/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || || || |||||||| ||||| || |||||||| |||||||||||
Sbjct 167644 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAA 167585
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | |||||||||||||| || ||| | || ||||||||||| || |||
Sbjct 167584 AGAGTACGACCATCTTCTAATTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGTGGG 167525
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| ||||| ||| || ||| |||| |||||||| | ||| ||
Sbjct 167524 ATTCCTTCCTTGTCTTGGATTTTAGCT-TTAACATTTTCAATGGTATCAGAAGGTTCCAC 167466
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|||| ||| |||||||| || || | |||||||| || ||||||||
Sbjct 167465 TTCTAGGGTGATGGTTTTTCCAGTTAATGTTTTTACGAAGATTTGCAT 167418
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| ||||||||||| || ||||||||||||||||| ||||| || |||||||||||
Sbjct 166504 CCTCCTCTCAATCTCAATACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAA 166445
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | | |||||||||||||| ||||| | || || |||||||| || |||
Sbjct 166444 AGAGTGCGCCCATCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGTGGG 166385
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| || || || || ||| || ||| |||| ||||| ||| ||| ||
Sbjct 166384 ATTCCTTCCTTATCTTGGATCTTAGCT-TTAACATTTTCAATGGTGTCGGATGGTTCGAC 166326
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||||||||| || | || || ||||||||||||||
Sbjct 166325 TTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166278
Score = 154 bits (170), Expect = 1e-32
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || |||||||| || || || |||||||| |||||||| ||
Sbjct 166960 CCACCTCTCAATCTCAATACTAAATGGAGAGTTGATTCTTTTTGGATGTTGTAGTCAGAA 166901
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | | ||||| | |||||| ||||| | || ||||||||||| || |||
Sbjct 166900 AGAGTACGCCCATCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGATCTGGAGGA 166841
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||||||||||| || || || ||| || ||| |||| || ||||| | ||| ||
Sbjct 166840 ATTCCTTCTTTATCCTGGATCTTAGCT-TTAACATTTTCAATTGTATCAGAAGGTTCAAC 166782
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| ||||| ||||||||||| || | || || |||||||||||||||
Sbjct 166781 TTCCAAGGTGATGGTTTTACCGGTTAAGGTCTTAACAAAAATTTGCATA 166733
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| ||||||||||| || || ||||| ||||| || |||||||| |||||||||||
Sbjct 166276 CCTCCTCTCAATCTCAACACCAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 166217
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | |||||||||||||||| ||||| | || || |||||||| || |||
Sbjct 166216 AGAGTGCGTCCGTCTTCTAATTGTTTACCAGCAAAGATTAATCGTTGTTGATCTGGAGGA 166157
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
||||||||||| || ||||| ||| || ||| |||| |||||||| || ||
Sbjct 166156 ATTCCTTCTTTATCCTGGATTTTAGCT-TTAACATTTTCAATGGTATCAGATGGCTCAAC 166098
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| ||||| || |||| ||||| ||||| || |||||
Sbjct 166097 TTCCAAAGTAATAGTTTTTCCAGTCAATGTTTTGACAAAGATCTGCAT 166050
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||||| |||||| || |||||||| |||||||| |||||||| ||||| |||||
Sbjct 166732 CCACCTCGCAATCTCAACACTAAATGGAGGGTGGATTCTTTTTGGATGTTATAATCCGAA 166673
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | ||||| | |||||| || ||| | || |||||||||||||| |||
Sbjct 166672 AGAGTACGTCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGGTCTGGTGGG 166613
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| |||||||| || ||||| ||| || || |||| || ||||| | ||| ||
Sbjct 166612 ATCCCTTCTTTATCCTGGATTTTAGCT-TTAACGTTTTCAATAGTATCAGAAGGTTCGAC 166554
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || ||||||||||| || | || || ||||||||||||||
Sbjct 166553 TTCCAATGTGATGGTTTTACCAGTTAAGGTCTTAACAAAAATTTGCAT 166506
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || || || |||||||| ||||| || |||||||| |||||||||||
Sbjct 167416 CCACCTCTTAACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAGAA 167357
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | ||||| | |||||| || ||| | |||||||||||||| || |||
Sbjct 167356 AGAGTACGACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGG 167297
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| ||||| ||||| ||| || ||| | || |||||||| || ||
Sbjct 167296 ATTCCTTCCTTGTCTTGGATTTTAGCT-TTAACATTCTCAATGGTATCAGATGGCTCAAC 167238
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| ||||| || |||| |||||| ||||| || |||||
Sbjct 167237 TTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Score = 138 bits (152), Expect = 8e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || |||||||| || || || ||||| || ||||||||
Sbjct 166048 CCACCTCTCAATCTCAATACCAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCAGAA 165989
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | ||||| |||||||| ||||| | |||||||||||||| || |||
Sbjct 165988 AGAGTACGTCCATCTTCCAATTGTTTTCCAGCAAAGATCAAACGTTGTTGATCTGGTGGG 165929
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| || || ||| || ||| || ||| |||||||||| ||| || ||
Sbjct 165928 ATTCCTTCCTTATCTTGAATCTTAGCT-TTAACATTTTCTATGGTGTCGGATGGCTCAAC 165870
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| || || || |||| |||||| || || || |||||
Sbjct 165869 TTCCAATGTAATAGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 165822
Score = 138 bits (152), Expect = 8e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||| || || || || || || || || ||||| || ||||||||
Sbjct 167188 CCACCTCTCAATCTCAATACCAAGTGGAGAGTAGATTCCTTTTGGATATTGTAATCAGAA 167129
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | | | ||||| | |||||| || ||| | || ||||||||||| || |||
Sbjct 167128 AGAGTGCGCCCATCTTCAAGTTGTTTACCGGCGAAGATTAAACGTTGTTGATCTGGAGGA 167069
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||| || || ||||| ||| || ||| |||| |||||||| || ||
Sbjct 167068 ATTCCTTCCTTATCCTGGATTTTAGCT-TTAACATTTTCAATGGTATCAGATGGCTCAAC 167010
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| ||||| ||||| || |||| |||||| |||||||| |||||
Sbjct 167009 TTCTAAAGTAATAGTTTTTCCAGTCAAAGTTTTGACAAAAATCTGCAT 166962
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| |||||||| || || || || || || || || ||||| || |||||||||
Sbjct 165820 CCACCCCTCAATCTCAATACCAAGTGGAGAGTTGATTCCTTTTGGATATTGTAATCGGAA 165761
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | |||||||||||||| || || | ||||| ||||||||||| |||
Sbjct 165760 AGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAGATCAACCGTTGTTGGTCTGGTGGG 165701
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| || |||||||| ||||| ||| ||| |||| || || || || ||
Sbjct 165700 ATCCCCTCTTTGTCCTGGATTTTCGCCTTCACATTTTCAATAGTGTCAGATGGCTCGACC 165641
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || ||||||||||| |||| ||||| || ||||| |||||
Sbjct 165640 TCTAACGTGATGGTTTTACCAGTCAAGGTTTTCACGAAAATCTGCAT 165594
>seq569
Length=200630
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || || ||||| || || || ||||| |||||||| ||| ||| | | | |||
Sbjct 134604 AACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTGCGTCCATCT 134545
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | |||||| |||||| | || ||||||||||| || ||| || || || |||||
Sbjct 134544 TCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTGTCT 134485
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
||||| ||| ||| |||| ||||||||| ||| || || | ||| ||||||
Sbjct 134484 TGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATGGTT 134425
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || || ||||| || |||||||||||
Sbjct 134424 TTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393
>seq62
Length=648032
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 15145 CAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCT 15204
|| ||||| || || || ||||| || |||||||| ||||||||||| ||| | |
Sbjct 445531 CATTCTTATTACCAACTGGAGGGTTGATTCTTTTTGAATGTTGTAATCAGAAAGAGTACG 445472
Query 15205 CGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTC 15264
| ||||| | |||||| |||| | | || |||||||||| || ||| ||||||||
Sbjct 445471 ACCATCTTCAAGTTGTTTACCAGAGAAGATTAAACGTTGTTCATCTGGTGGGATTCCTTC 445412
Query 15265 TTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGG 15323
| || ||||| ||| || ||| |||| |||||||| | ||| || ||||||
Sbjct 445411 CGTATCTTGGATTTTAGCT-TTAACATTTTCAATGGTATCAGAAGGTTCCACTCCTAAGG 445353
Query 15324 TAATGGTTTTACCTGTCAGAGTTTTTACAAAAAT 15357
| ||| ||| || || | ||||||||| || ||
Sbjct 445352 TGATGATTTCTCCAGTTAAAGTTTTTACGAAGAT 445319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362147961704457
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