Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01]
7,077 sequences; 270,533,845 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq569 102 7e-17
seq412 89.7 4e-13
seq241 82.4 6e-11
>seq569
Length=200630
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTC 48573
||||| || ||||| || ||||||||||||||||| || | | | || || | ||
Sbjct 134604 AACACCAAGTGAAGCGTCGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTG-CGTCCATC 134546
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
||||| || ||||| || | |||||||| || ||||| || | || ||||||||
Sbjct 134545 TTCCAGTTGTTTACCAGCGAAGATTAAACGTTGTTGATCTGGTGGGATACCCTCCTTGTC 134486
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||||| ||||| | | |||||||||| | || ||||| || |||||
Sbjct 134485 TTGGATTTTTGCCTTGACATTTTCGATGGTATCGGAGGGTTCAACCTCGAGGGTGATGGT 134426
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||||||||| || |||||||| ||||| |||||
Sbjct 134425 TTTACCGGTTAGGGTTTTCACGAAAATTTGCAT 134393
>seq412
Length=275653
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| || ||||| |||| |||||||| | || || || ||||| || |||||||
Sbjct 83015 CCACCACGCAATCTTAGGACTAAATGCAACGTTGATTCTTTCTGAATATTATAATCAGAA 82956
Query 48560 A-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
| | || ||| | || || || || || || || ||||||||||||| |||||| ||
Sbjct 82955 AGAGTG-CGCCCATCTTCGAGTTGTTTTCCCGCGAAAATTAAACGCTGTTGATCCGGTGG 82897
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | || ||||| || || ||||| | | |||||||||| || |||
Sbjct 82896 GATTCCCTCTTTGTCTTGGATCTTAGCCTTGACATTTTCGATGGTATCGGAAGGCTCGAC 82837
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | |||||||| || || || | |||||| ||||| ||||||||
Sbjct 82836 CTCAAGAGTTATGGTCTTGCCAGTTAAAGTTTTAACAAAGATCTGCAT 82789
>seq241
Length=949647
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 48509 AACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CG 48567
||||| || |||||||| || || || ||||| ||||||||||||| || || ||
Sbjct 167407 AACCTCAATACTAAATGGAGGGTTGATTCTTTTTGGATGTTGTAATCAG-AAAGAGTACG 167349
Query 48568 CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTC 48627
| || || || || |||||| || | || ||||| || ||||| || | | |||
Sbjct 167348 ACCATCTTCAAGTTGTTTACCGGCGAAGATCAAACGTTGTTGATCTGGTGGGATTCCTTC 167289
Query 48628 CTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGT 48687
|||||| ||||| || | | | | |||||||| | | ||| || | |||
Sbjct 167288 CTTGTCTTGGATTTTAGCTTTAACATTCTCAATGGTATCAGATGGCTCAACTTCCAATGT 167229
Query 48688 TATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || | |||||| ||||| ||||||||
Sbjct 167228 AATAGTTTTTCCAGTCAAAGTTTTGACAAAGATCTGCAT 167190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421214866689077
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |